Gene : Thecc1EG026958 T. cacao v1.1
Defline:  (1 of 3) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  62
Name:  ? Thecc1EG026958 Secondary Identifier:  ? PAC:27437646
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026958 0.5kb upstream 0.5kb upstream 6704 true scaffold_6: 502901-509604 Theobroma cacao
Thecc1EG026958 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 509105-509604 Theobroma cacao
Thecc1EG026958 0.5kb downstream 0.5kb downstream 6704 true scaffold_6: 502401-509104 Theobroma cacao
Thecc1EG026958 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 502401-502900 Theobroma cacao
Thecc1EG026958 1.0kb upstream 1.0kb upstream 7204 true scaffold_6: 502901-510104 Theobroma cacao
Thecc1EG026958 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 509105-510104 Theobroma cacao
Thecc1EG026958 1.0kb downstream 1.0kb downstream 7204 true scaffold_6: 501901-509104 Theobroma cacao
Thecc1EG026958 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 501901-502900 Theobroma cacao
Thecc1EG026958 2.0kb upstream 2.0kb upstream 8204 true scaffold_6: 502901-511104 Theobroma cacao
Thecc1EG026958 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 509105-511104 Theobroma cacao
Thecc1EG026958 2.0kb downstream 2.0kb downstream 8204 true scaffold_6: 500901-509104 Theobroma cacao
Thecc1EG026958 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 500901-502900 Theobroma cacao
Thecc1EG026958 5.0kb upstream 5.0kb upstream 11204 true scaffold_6: 502901-514104 Theobroma cacao
Thecc1EG026958 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 509105-514104 Theobroma cacao
Thecc1EG026958 5.0kb downstream 5.0kb downstream 11204 true scaffold_6: 497901-509104 Theobroma cacao
Thecc1EG026958 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 497901-502900 Theobroma cacao
Thecc1EG026958 10.0kb upstream 10.0kb upstream 16204 true scaffold_6: 502901-519104 Theobroma cacao
Thecc1EG026958 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 509105-519104 Theobroma cacao
Thecc1EG026958 10.0kb downstream 10.0kb downstream 16204 true scaffold_6: 492901-509104 Theobroma cacao
Thecc1EG026958 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 492901-502900 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820916 5264 Brassicales-Malvales Singleton cluster - no MSA
124348204 5266 SBM View MSA
124180971 5268 Malvidae View MSA
124038212 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain