Gene : Pavir.6NG288100 P. virgatum v4.1
Defline:  (1 of 3) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Genomic Order:  2602
Name:  ? Pavir.6NG288100 Secondary Identifier:  ? PAC:37646302
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG288100 0.5kb upstream 0.5kb upstream 4409 true Chr06N: 71227795-71232203 Panicum virgatum
Pavir.6NG288100 0.5kb upstream 0.5kb upstream 500 false Chr06N: 71227795-71228294 Panicum virgatum
Pavir.6NG288100 0.5kb downstream 0.5kb downstream 4409 true Chr06N: 71228295-71232703 Panicum virgatum
Pavir.6NG288100 0.5kb downstream 0.5kb downstream 500 false Chr06N: 71232204-71232703 Panicum virgatum
Pavir.6NG288100 1.0kb upstream 1.0kb upstream 4909 true Chr06N: 71227295-71232203 Panicum virgatum
Pavir.6NG288100 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 71227295-71228294 Panicum virgatum
Pavir.6NG288100 1.0kb downstream 1.0kb downstream 4909 true Chr06N: 71228295-71233203 Panicum virgatum
Pavir.6NG288100 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 71232204-71233203 Panicum virgatum
Pavir.6NG288100 2.0kb upstream 2.0kb upstream 5909 true Chr06N: 71226295-71232203 Panicum virgatum
Pavir.6NG288100 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 71226295-71228294 Panicum virgatum
Pavir.6NG288100 2.0kb downstream 2.0kb downstream 5909 true Chr06N: 71228295-71234203 Panicum virgatum
Pavir.6NG288100 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 71232204-71234203 Panicum virgatum
Pavir.6NG288100 5.0kb upstream 5.0kb upstream 8909 true Chr06N: 71223295-71232203 Panicum virgatum
Pavir.6NG288100 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 71223295-71228294 Panicum virgatum
Pavir.6NG288100 5.0kb downstream 5.0kb downstream 8909 true Chr06N: 71228295-71237203 Panicum virgatum
Pavir.6NG288100 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 71232204-71237203 Panicum virgatum
Pavir.6NG288100 10.0kb upstream 10.0kb upstream 13909 true Chr06N: 71218295-71232203 Panicum virgatum
Pavir.6NG288100 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 71218295-71228294 Panicum virgatum
Pavir.6NG288100 10.0kb downstream 10.0kb downstream 13909 true Chr06N: 71228295-71242203 Panicum virgatum
Pavir.6NG288100 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 71232204-71242203 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027111 5273 Angiosperm View MSA
122098427 5267 Panicoideae Singleton cluster - no MSA
124395272 5269 Grass Singleton cluster - no MSA
121296811 5274 Embryophyte View MSA
123428597 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain