Gene : Thecc1EG026947 T. cacao v1.1
Defline:  (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 Genomic Order:  52
Name:  ? Thecc1EG026947 Secondary Identifier:  ? PAC:27438279
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026947 0.5kb upstream 0.5kb upstream 7045 true scaffold_6: 445707-452751 Theobroma cacao
Thecc1EG026947 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 445707-446206 Theobroma cacao
Thecc1EG026947 0.5kb downstream 0.5kb downstream 7045 true scaffold_6: 446207-453251 Theobroma cacao
Thecc1EG026947 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 452752-453251 Theobroma cacao
Thecc1EG026947 1.0kb upstream 1.0kb upstream 7545 true scaffold_6: 445207-452751 Theobroma cacao
Thecc1EG026947 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 445207-446206 Theobroma cacao
Thecc1EG026947 1.0kb downstream 1.0kb downstream 7545 true scaffold_6: 446207-453751 Theobroma cacao
Thecc1EG026947 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 452752-453751 Theobroma cacao
Thecc1EG026947 2.0kb upstream 2.0kb upstream 8545 true scaffold_6: 444207-452751 Theobroma cacao
Thecc1EG026947 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 444207-446206 Theobroma cacao
Thecc1EG026947 2.0kb downstream 2.0kb downstream 8545 true scaffold_6: 446207-454751 Theobroma cacao
Thecc1EG026947 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 452752-454751 Theobroma cacao
Thecc1EG026947 5.0kb upstream 5.0kb upstream 11545 true scaffold_6: 441207-452751 Theobroma cacao
Thecc1EG026947 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 441207-446206 Theobroma cacao
Thecc1EG026947 5.0kb downstream 5.0kb downstream 11545 true scaffold_6: 446207-457751 Theobroma cacao
Thecc1EG026947 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 452752-457751 Theobroma cacao
Thecc1EG026947 10.0kb upstream 10.0kb upstream 16545 true scaffold_6: 436207-452751 Theobroma cacao
Thecc1EG026947 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 436207-446206 Theobroma cacao
Thecc1EG026947 10.0kb downstream 10.0kb downstream 16545 true scaffold_6: 446207-462751 Theobroma cacao
Thecc1EG026947 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 452752-462751 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835854 5264 Brassicales-Malvales View MSA
124344171 5266 SBM View MSA
124253949 5268 Malvidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain