Gene : Thecc1EG026952 T. cacao v1.1

Defline:  (1 of 1) K12832 - splicing factor 3B subunit 5 (SF3B5, SF3B10) Genomic Order:  56
Name:  ? Thecc1EG026952 Secondary Identifier:  ? PAC:27439501

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026952 0.5kb upstream 0.5kb upstream 3266 true scaffold_6: 467863-471128 Theobroma cacao
Thecc1EG026952 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 467863-468362 Theobroma cacao
Thecc1EG026952 0.5kb downstream 0.5kb downstream 3266 true scaffold_6: 468363-471628 Theobroma cacao
Thecc1EG026952 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 471129-471628 Theobroma cacao
Thecc1EG026952 1.0kb upstream 1.0kb upstream 3766 true scaffold_6: 467363-471128 Theobroma cacao
Thecc1EG026952 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 467363-468362 Theobroma cacao
Thecc1EG026952 1.0kb downstream 1.0kb downstream 3766 true scaffold_6: 468363-472128 Theobroma cacao
Thecc1EG026952 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 471129-472128 Theobroma cacao
Thecc1EG026952 2.0kb upstream 2.0kb upstream 4766 true scaffold_6: 466363-471128 Theobroma cacao
Thecc1EG026952 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 466363-468362 Theobroma cacao
Thecc1EG026952 2.0kb downstream 2.0kb downstream 4766 true scaffold_6: 468363-473128 Theobroma cacao
Thecc1EG026952 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 471129-473128 Theobroma cacao
Thecc1EG026952 5.0kb upstream 5.0kb upstream 7766 true scaffold_6: 463363-471128 Theobroma cacao
Thecc1EG026952 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 463363-468362 Theobroma cacao
Thecc1EG026952 5.0kb downstream 5.0kb downstream 7766 true scaffold_6: 468363-476128 Theobroma cacao
Thecc1EG026952 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 471129-476128 Theobroma cacao
Thecc1EG026952 10.0kb upstream 10.0kb upstream 12766 true scaffold_6: 458363-471128 Theobroma cacao
Thecc1EG026952 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 458363-468362 Theobroma cacao
Thecc1EG026952 10.0kb downstream 10.0kb downstream 12766 true scaffold_6: 468363-481128 Theobroma cacao
Thecc1EG026952 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 471129-481128 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
123828045 5264 Brassicales-Malvales View MSA
124341807 5266 SBM View MSA
124248049 5268 Malvidae View MSA
124069097 5270 Rosid View MSA
123746421 5271 Pentapetalae View MSA
122791090 5272 Eudicot View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain