Gene : Thecc1EG026938 T. cacao v1.1
Defline:  (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase Genomic Order:  43
Name:  ? Thecc1EG026938 Secondary Identifier:  ? PAC:27440527
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao VALDEG-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026938 0.5kb upstream 0.5kb upstream 7655 true scaffold_6: 399790-407444 Theobroma cacao
Thecc1EG026938 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 406945-407444 Theobroma cacao
Thecc1EG026938 0.5kb downstream 0.5kb downstream 7655 true scaffold_6: 399290-406944 Theobroma cacao
Thecc1EG026938 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 399290-399789 Theobroma cacao
Thecc1EG026938 1.0kb upstream 1.0kb upstream 8155 true scaffold_6: 399790-407944 Theobroma cacao
Thecc1EG026938 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 406945-407944 Theobroma cacao
Thecc1EG026938 1.0kb downstream 1.0kb downstream 8155 true scaffold_6: 398790-406944 Theobroma cacao
Thecc1EG026938 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 398790-399789 Theobroma cacao
Thecc1EG026938 2.0kb upstream 2.0kb upstream 9155 true scaffold_6: 399790-408944 Theobroma cacao
Thecc1EG026938 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 406945-408944 Theobroma cacao
Thecc1EG026938 2.0kb downstream 2.0kb downstream 9155 true scaffold_6: 397790-406944 Theobroma cacao
Thecc1EG026938 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 397790-399789 Theobroma cacao
Thecc1EG026938 5.0kb upstream 5.0kb upstream 12155 true scaffold_6: 399790-411944 Theobroma cacao
Thecc1EG026938 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 406945-411944 Theobroma cacao
Thecc1EG026938 5.0kb downstream 5.0kb downstream 12155 true scaffold_6: 394790-406944 Theobroma cacao
Thecc1EG026938 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 394790-399789 Theobroma cacao
Thecc1EG026938 10.0kb upstream 10.0kb upstream 17155 true scaffold_6: 399790-416944 Theobroma cacao
Thecc1EG026938 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 406945-416944 Theobroma cacao
Thecc1EG026938 10.0kb downstream 10.0kb downstream 17155 true scaffold_6: 389790-406944 Theobroma cacao
Thecc1EG026938 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 389790-399789 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831545 5264 Brassicales-Malvales View MSA
124341286 5266 SBM View MSA
124237017 5268 Malvidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain