Gene : Thecc1EG026920 T. cacao v1.1
Defline:  (1 of 1) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  26
Name:  ? Thecc1EG026920 Secondary Identifier:  ? PAC:27440519
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5837 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026920 0.5kb upstream 0.5kb upstream 8913 true scaffold_6: 304744-313656 Theobroma cacao
Thecc1EG026920 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 313157-313656 Theobroma cacao
Thecc1EG026920 0.5kb downstream 0.5kb downstream 8913 true scaffold_6: 304244-313156 Theobroma cacao
Thecc1EG026920 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 304244-304743 Theobroma cacao
Thecc1EG026920 1.0kb upstream 1.0kb upstream 9413 true scaffold_6: 304744-314156 Theobroma cacao
Thecc1EG026920 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 313157-314156 Theobroma cacao
Thecc1EG026920 1.0kb downstream 1.0kb downstream 9413 true scaffold_6: 303744-313156 Theobroma cacao
Thecc1EG026920 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 303744-304743 Theobroma cacao
Thecc1EG026920 2.0kb upstream 2.0kb upstream 10413 true scaffold_6: 304744-315156 Theobroma cacao
Thecc1EG026920 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 313157-315156 Theobroma cacao
Thecc1EG026920 2.0kb downstream 2.0kb downstream 10413 true scaffold_6: 302744-313156 Theobroma cacao
Thecc1EG026920 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 302744-304743 Theobroma cacao
Thecc1EG026920 5.0kb upstream 5.0kb upstream 13413 true scaffold_6: 304744-318156 Theobroma cacao
Thecc1EG026920 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 313157-318156 Theobroma cacao
Thecc1EG026920 5.0kb downstream 5.0kb downstream 13413 true scaffold_6: 299744-313156 Theobroma cacao
Thecc1EG026920 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 299744-304743 Theobroma cacao
Thecc1EG026920 10.0kb upstream 10.0kb upstream 18413 true scaffold_6: 304744-323156 Theobroma cacao
Thecc1EG026920 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 313157-323156 Theobroma cacao
Thecc1EG026920 10.0kb downstream 10.0kb downstream 18413 true scaffold_6: 294744-313156 Theobroma cacao
Thecc1EG026920 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 294744-304743 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834276 5264 Brassicales-Malvales View MSA
124340453 5266 SBM View MSA
124243715 5268 Malvidae View MSA
124061989 5270 Rosid View MSA
123752148 5271 Pentapetalae View MSA
122787718 5272 Eudicot View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain