Gene : Thecc1EG026910 T. cacao v1.1
Defline:  (1 of 1) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED Genomic Order:  19
Name:  ? Thecc1EG026910 Secondary Identifier:  ? PAC:27438638
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-101 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026910 0.5kb upstream 0.5kb upstream 4315 true scaffold_6: 263148-267462 Theobroma cacao
Thecc1EG026910 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 263148-263647 Theobroma cacao
Thecc1EG026910 0.5kb downstream 0.5kb downstream 4315 true scaffold_6: 263648-267962 Theobroma cacao
Thecc1EG026910 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 267463-267962 Theobroma cacao
Thecc1EG026910 1.0kb upstream 1.0kb upstream 4815 true scaffold_6: 262648-267462 Theobroma cacao
Thecc1EG026910 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 262648-263647 Theobroma cacao
Thecc1EG026910 1.0kb downstream 1.0kb downstream 4815 true scaffold_6: 263648-268462 Theobroma cacao
Thecc1EG026910 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 267463-268462 Theobroma cacao
Thecc1EG026910 2.0kb upstream 2.0kb upstream 5815 true scaffold_6: 261648-267462 Theobroma cacao
Thecc1EG026910 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 261648-263647 Theobroma cacao
Thecc1EG026910 2.0kb downstream 2.0kb downstream 5815 true scaffold_6: 263648-269462 Theobroma cacao
Thecc1EG026910 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 267463-269462 Theobroma cacao
Thecc1EG026910 5.0kb upstream 5.0kb upstream 8815 true scaffold_6: 258648-267462 Theobroma cacao
Thecc1EG026910 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 258648-263647 Theobroma cacao
Thecc1EG026910 5.0kb downstream 5.0kb downstream 8815 true scaffold_6: 263648-272462 Theobroma cacao
Thecc1EG026910 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 267463-272462 Theobroma cacao
Thecc1EG026910 10.0kb upstream 10.0kb upstream 13815 true scaffold_6: 253648-267462 Theobroma cacao
Thecc1EG026910 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 253648-263647 Theobroma cacao
Thecc1EG026910 10.0kb downstream 10.0kb downstream 13815 true scaffold_6: 263648-277462 Theobroma cacao
Thecc1EG026910 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 267463-277462 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337411 5266 SBM View MSA
123837439 5264 Brassicales-Malvales View MSA
124248953 5268 Malvidae View MSA
124064755 5270 Rosid View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain