Gene : Thecc1EG027267 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  294
Name:  ? Thecc1EG027267 Secondary Identifier:  ? PAC:27440947
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027267 0.5kb upstream 0.5kb upstream 3685 true scaffold_6: 2619922-2623606 Theobroma cacao
Thecc1EG027267 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2619922-2620421 Theobroma cacao
Thecc1EG027267 0.5kb downstream 0.5kb downstream 3685 true scaffold_6: 2620422-2624106 Theobroma cacao
Thecc1EG027267 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2623607-2624106 Theobroma cacao
Thecc1EG027267 1.0kb upstream 1.0kb upstream 4185 true scaffold_6: 2619422-2623606 Theobroma cacao
Thecc1EG027267 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2619422-2620421 Theobroma cacao
Thecc1EG027267 1.0kb downstream 1.0kb downstream 4185 true scaffold_6: 2620422-2624606 Theobroma cacao
Thecc1EG027267 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2623607-2624606 Theobroma cacao
Thecc1EG027267 2.0kb upstream 2.0kb upstream 5185 true scaffold_6: 2618422-2623606 Theobroma cacao
Thecc1EG027267 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2618422-2620421 Theobroma cacao
Thecc1EG027267 2.0kb downstream 2.0kb downstream 5185 true scaffold_6: 2620422-2625606 Theobroma cacao
Thecc1EG027267 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2623607-2625606 Theobroma cacao
Thecc1EG027267 5.0kb upstream 5.0kb upstream 8185 true scaffold_6: 2615422-2623606 Theobroma cacao
Thecc1EG027267 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2615422-2620421 Theobroma cacao
Thecc1EG027267 5.0kb downstream 5.0kb downstream 8185 true scaffold_6: 2620422-2628606 Theobroma cacao
Thecc1EG027267 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2623607-2628606 Theobroma cacao
Thecc1EG027267 10.0kb upstream 10.0kb upstream 13185 true scaffold_6: 2610422-2623606 Theobroma cacao
Thecc1EG027267 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2610422-2620421 Theobroma cacao
Thecc1EG027267 10.0kb downstream 10.0kb downstream 13185 true scaffold_6: 2620422-2633606 Theobroma cacao
Thecc1EG027267 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2623607-2633606 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838324 5264 Brassicales-Malvales View MSA
124346837 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain