Gene : Thecc1EG027270 T. cacao v1.1
Defline:  (1 of 18) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  296
Name:  ? Thecc1EG027270 Secondary Identifier:  ? PAC:27437696
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027270 0.5kb upstream 0.5kb upstream 3943 true scaffold_6: 2627565-2631507 Theobroma cacao
Thecc1EG027270 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2631008-2631507 Theobroma cacao
Thecc1EG027270 0.5kb downstream 0.5kb downstream 3943 true scaffold_6: 2627065-2631007 Theobroma cacao
Thecc1EG027270 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2627065-2627564 Theobroma cacao
Thecc1EG027270 1.0kb upstream 1.0kb upstream 4443 true scaffold_6: 2627565-2632007 Theobroma cacao
Thecc1EG027270 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2631008-2632007 Theobroma cacao
Thecc1EG027270 1.0kb downstream 1.0kb downstream 4443 true scaffold_6: 2626565-2631007 Theobroma cacao
Thecc1EG027270 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2626565-2627564 Theobroma cacao
Thecc1EG027270 2.0kb upstream 2.0kb upstream 5443 true scaffold_6: 2627565-2633007 Theobroma cacao
Thecc1EG027270 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2631008-2633007 Theobroma cacao
Thecc1EG027270 2.0kb downstream 2.0kb downstream 5443 true scaffold_6: 2625565-2631007 Theobroma cacao
Thecc1EG027270 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2625565-2627564 Theobroma cacao
Thecc1EG027270 5.0kb upstream 5.0kb upstream 8443 true scaffold_6: 2627565-2636007 Theobroma cacao
Thecc1EG027270 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2631008-2636007 Theobroma cacao
Thecc1EG027270 5.0kb downstream 5.0kb downstream 8443 true scaffold_6: 2622565-2631007 Theobroma cacao
Thecc1EG027270 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2622565-2627564 Theobroma cacao
Thecc1EG027270 10.0kb upstream 10.0kb upstream 13443 true scaffold_6: 2627565-2641007 Theobroma cacao
Thecc1EG027270 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2631008-2641007 Theobroma cacao
Thecc1EG027270 10.0kb downstream 10.0kb downstream 13443 true scaffold_6: 2617565-2631007 Theobroma cacao
Thecc1EG027270 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2617565-2627564 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826300 5264 Brassicales-Malvales View MSA
124348019 5266 SBM View MSA
124247342 5268 Malvidae View MSA
124074797 5270 Rosid View MSA
123752010 5271 Pentapetalae View MSA
122794542 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain