Gene : Pavir.7KG081800 P. virgatum v4.1
Defline:  (1 of 3) PTHR11586:SF18 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN Genomic Order:  5
Name:  ? Pavir.7KG081800 Secondary Identifier:  ? PAC:37686329
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7KG081800 0.5kb upstream 0.5kb upstream 2729 true Chr07K: 57717-60445 Panicum virgatum
Pavir.7KG081800 0.5kb upstream 0.5kb upstream 500 false Chr07K: 57717-58216 Panicum virgatum
Pavir.7KG081800 0.5kb downstream 0.5kb downstream 2729 true Chr07K: 58217-60945 Panicum virgatum
Pavir.7KG081800 0.5kb downstream 0.5kb downstream 500 false Chr07K: 60446-60945 Panicum virgatum
Pavir.7KG081800 1.0kb upstream 1.0kb upstream 3229 true Chr07K: 57217-60445 Panicum virgatum
Pavir.7KG081800 1.0kb upstream 1.0kb upstream 1000 false Chr07K: 57217-58216 Panicum virgatum
Pavir.7KG081800 1.0kb downstream 1.0kb downstream 3229 true Chr07K: 58217-61445 Panicum virgatum
Pavir.7KG081800 1.0kb downstream 1.0kb downstream 1000 false Chr07K: 60446-61445 Panicum virgatum
Pavir.7KG081800 2.0kb upstream 2.0kb upstream 4229 true Chr07K: 56217-60445 Panicum virgatum
Pavir.7KG081800 2.0kb upstream 2.0kb upstream 2000 false Chr07K: 56217-58216 Panicum virgatum
Pavir.7KG081800 2.0kb downstream 2.0kb downstream 4229 true Chr07K: 58217-62445 Panicum virgatum
Pavir.7KG081800 2.0kb downstream 2.0kb downstream 2000 false Chr07K: 60446-62445 Panicum virgatum
Pavir.7KG081800 5.0kb upstream 5.0kb upstream 7229 true Chr07K: 53217-60445 Panicum virgatum
Pavir.7KG081800 5.0kb upstream 5.0kb upstream 5000 false Chr07K: 53217-58216 Panicum virgatum
Pavir.7KG081800 5.0kb downstream 5.0kb downstream 7229 true Chr07K: 58217-65445 Panicum virgatum
Pavir.7KG081800 5.0kb downstream 5.0kb downstream 5000 false Chr07K: 60446-65445 Panicum virgatum
Pavir.7KG081800 10.0kb upstream 10.0kb upstream 12229 true Chr07K: 48217-60445 Panicum virgatum
Pavir.7KG081800 10.0kb upstream 10.0kb upstream 10000 false Chr07K: 48217-58216 Panicum virgatum
Pavir.7KG081800 10.0kb downstream 10.0kb downstream 12229 true Chr07K: 58217-70445 Panicum virgatum
Pavir.7KG081800 10.0kb downstream 10.0kb downstream 10000 false Chr07K: 60446-70445 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178382 5267 Panicoideae View MSA
124568725 5269 Grass View MSA
122045155 5273 Angiosperm View MSA
121346605 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain