Gene : Thecc1EG027241 T. cacao v1.1
Defline:  (1 of 6) K07407 - alpha-galactosidase (E3.2.1.22B, galA, rafA) Genomic Order:  276
Name:  ? Thecc1EG027241 Secondary Identifier:  ? PAC:27440072
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1301 Theobroma cacao pathologic  
Tcacao PWY-6527 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027241 0.5kb upstream 0.5kb upstream 4763 true scaffold_6: 2484347-2489109 Theobroma cacao
Thecc1EG027241 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2484347-2484846 Theobroma cacao
Thecc1EG027241 0.5kb downstream 0.5kb downstream 4763 true scaffold_6: 2484847-2489609 Theobroma cacao
Thecc1EG027241 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2489110-2489609 Theobroma cacao
Thecc1EG027241 1.0kb upstream 1.0kb upstream 5263 true scaffold_6: 2483847-2489109 Theobroma cacao
Thecc1EG027241 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2483847-2484846 Theobroma cacao
Thecc1EG027241 1.0kb downstream 1.0kb downstream 5263 true scaffold_6: 2484847-2490109 Theobroma cacao
Thecc1EG027241 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2489110-2490109 Theobroma cacao
Thecc1EG027241 2.0kb upstream 2.0kb upstream 6263 true scaffold_6: 2482847-2489109 Theobroma cacao
Thecc1EG027241 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2482847-2484846 Theobroma cacao
Thecc1EG027241 2.0kb downstream 2.0kb downstream 6263 true scaffold_6: 2484847-2491109 Theobroma cacao
Thecc1EG027241 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2489110-2491109 Theobroma cacao
Thecc1EG027241 5.0kb upstream 5.0kb upstream 9263 true scaffold_6: 2479847-2489109 Theobroma cacao
Thecc1EG027241 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2479847-2484846 Theobroma cacao
Thecc1EG027241 5.0kb downstream 5.0kb downstream 9263 true scaffold_6: 2484847-2494109 Theobroma cacao
Thecc1EG027241 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2489110-2494109 Theobroma cacao
Thecc1EG027241 10.0kb upstream 10.0kb upstream 14263 true scaffold_6: 2474847-2489109 Theobroma cacao
Thecc1EG027241 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2474847-2484846 Theobroma cacao
Thecc1EG027241 10.0kb downstream 10.0kb downstream 14263 true scaffold_6: 2484847-2499109 Theobroma cacao
Thecc1EG027241 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2489110-2499109 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840043 5264 Brassicales-Malvales View MSA
124322672 5266 SBM View MSA
124247152 5268 Malvidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain