Gene : Pavir.7KG116300 P. virgatum v4.1
Defline:  (1 of 3) K00164 - 2-oxoglutarate dehydrogenase E1 component (OGDH, sucA) Genomic Order:  920
Name:  ? Pavir.7KG116300 Secondary Identifier:  ? PAC:37687110
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5084 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7KG116300 0.5kb upstream 0.5kb upstream 7236 true Chr07K: 31713148-31720383 Panicum virgatum
Pavir.7KG116300 0.5kb upstream 0.5kb upstream 500 false Chr07K: 31719884-31720383 Panicum virgatum
Pavir.7KG116300 0.5kb downstream 0.5kb downstream 7236 true Chr07K: 31712648-31719883 Panicum virgatum
Pavir.7KG116300 0.5kb downstream 0.5kb downstream 500 false Chr07K: 31712648-31713147 Panicum virgatum
Pavir.7KG116300 1.0kb upstream 1.0kb upstream 7736 true Chr07K: 31713148-31720883 Panicum virgatum
Pavir.7KG116300 1.0kb upstream 1.0kb upstream 1000 false Chr07K: 31719884-31720883 Panicum virgatum
Pavir.7KG116300 1.0kb downstream 1.0kb downstream 7736 true Chr07K: 31712148-31719883 Panicum virgatum
Pavir.7KG116300 1.0kb downstream 1.0kb downstream 1000 false Chr07K: 31712148-31713147 Panicum virgatum
Pavir.7KG116300 2.0kb upstream 2.0kb upstream 8736 true Chr07K: 31713148-31721883 Panicum virgatum
Pavir.7KG116300 2.0kb upstream 2.0kb upstream 2000 false Chr07K: 31719884-31721883 Panicum virgatum
Pavir.7KG116300 2.0kb downstream 2.0kb downstream 8736 true Chr07K: 31711148-31719883 Panicum virgatum
Pavir.7KG116300 2.0kb downstream 2.0kb downstream 2000 false Chr07K: 31711148-31713147 Panicum virgatum
Pavir.7KG116300 5.0kb upstream 5.0kb upstream 11736 true Chr07K: 31713148-31724883 Panicum virgatum
Pavir.7KG116300 5.0kb upstream 5.0kb upstream 5000 false Chr07K: 31719884-31724883 Panicum virgatum
Pavir.7KG116300 5.0kb downstream 5.0kb downstream 11736 true Chr07K: 31708148-31719883 Panicum virgatum
Pavir.7KG116300 5.0kb downstream 5.0kb downstream 5000 false Chr07K: 31708148-31713147 Panicum virgatum
Pavir.7KG116300 10.0kb upstream 10.0kb upstream 16736 true Chr07K: 31713148-31729883 Panicum virgatum
Pavir.7KG116300 10.0kb upstream 10.0kb upstream 10000 false Chr07K: 31719884-31729883 Panicum virgatum
Pavir.7KG116300 10.0kb downstream 10.0kb downstream 16736 true Chr07K: 31703148-31719883 Panicum virgatum
Pavir.7KG116300 10.0kb downstream 10.0kb downstream 10000 false Chr07K: 31703148-31713147 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179314 5267 Panicoideae View MSA
124575001 5269 Grass View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain