Gene : Thecc1EG027201 T. cacao v1.1
Defline:  (1 of 4) K00507 - stearoyl-CoA desaturase (delta-9 desaturase) (SCD, desC) Genomic Order:  245
Name:  ? Thecc1EG027201 Secondary Identifier:  ? PAC:27438044
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027201 0.5kb upstream 0.5kb upstream 9324 true scaffold_6: 2225781-2235104 Theobroma cacao
Thecc1EG027201 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2234605-2235104 Theobroma cacao
Thecc1EG027201 0.5kb downstream 0.5kb downstream 9324 true scaffold_6: 2225281-2234604 Theobroma cacao
Thecc1EG027201 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2225281-2225780 Theobroma cacao
Thecc1EG027201 1.0kb upstream 1.0kb upstream 9824 true scaffold_6: 2225781-2235604 Theobroma cacao
Thecc1EG027201 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2234605-2235604 Theobroma cacao
Thecc1EG027201 1.0kb downstream 1.0kb downstream 9824 true scaffold_6: 2224781-2234604 Theobroma cacao
Thecc1EG027201 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2224781-2225780 Theobroma cacao
Thecc1EG027201 2.0kb upstream 2.0kb upstream 10824 true scaffold_6: 2225781-2236604 Theobroma cacao
Thecc1EG027201 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2234605-2236604 Theobroma cacao
Thecc1EG027201 2.0kb downstream 2.0kb downstream 10824 true scaffold_6: 2223781-2234604 Theobroma cacao
Thecc1EG027201 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2223781-2225780 Theobroma cacao
Thecc1EG027201 5.0kb upstream 5.0kb upstream 13824 true scaffold_6: 2225781-2239604 Theobroma cacao
Thecc1EG027201 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2234605-2239604 Theobroma cacao
Thecc1EG027201 5.0kb downstream 5.0kb downstream 13824 true scaffold_6: 2220781-2234604 Theobroma cacao
Thecc1EG027201 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2220781-2225780 Theobroma cacao
Thecc1EG027201 10.0kb upstream 10.0kb upstream 18824 true scaffold_6: 2225781-2244604 Theobroma cacao
Thecc1EG027201 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2234605-2244604 Theobroma cacao
Thecc1EG027201 10.0kb downstream 10.0kb downstream 18824 true scaffold_6: 2215781-2234604 Theobroma cacao
Thecc1EG027201 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2215781-2225780 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792764 5273 Angiosperm View MSA
123820843 5264 Brassicales-Malvales Singleton cluster - no MSA
124317044 5266 SBM Singleton cluster - no MSA
124165819 5268 Malvidae Singleton cluster - no MSA
124041058 5270 Rosid View MSA
123756067 5271 Pentapetalae View MSA
122798511 5272 Eudicot View MSA
121063964 5274 Embryophyte View MSA
123103664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain