Gene : Thecc1EG027158 T. cacao v1.1
Defline:  (1 of 4) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Genomic Order:  219
Name:  ? Thecc1EG027158 Secondary Identifier:  ? PAC:27439784
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPASYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3561 Theobroma cacao pathologic  
Tcacao PWY-7039 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027158 0.5kb upstream 0.5kb upstream 12445 true scaffold_6: 1944234-1956678 Theobroma cacao
Thecc1EG027158 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1944234-1944733 Theobroma cacao
Thecc1EG027158 0.5kb downstream 0.5kb downstream 12445 true scaffold_6: 1944734-1957178 Theobroma cacao
Thecc1EG027158 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1956679-1957178 Theobroma cacao
Thecc1EG027158 1.0kb upstream 1.0kb upstream 12945 true scaffold_6: 1943734-1956678 Theobroma cacao
Thecc1EG027158 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1943734-1944733 Theobroma cacao
Thecc1EG027158 1.0kb downstream 1.0kb downstream 12945 true scaffold_6: 1944734-1957678 Theobroma cacao
Thecc1EG027158 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1956679-1957678 Theobroma cacao
Thecc1EG027158 2.0kb upstream 2.0kb upstream 13945 true scaffold_6: 1942734-1956678 Theobroma cacao
Thecc1EG027158 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1942734-1944733 Theobroma cacao
Thecc1EG027158 2.0kb downstream 2.0kb downstream 13945 true scaffold_6: 1944734-1958678 Theobroma cacao
Thecc1EG027158 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1956679-1958678 Theobroma cacao
Thecc1EG027158 5.0kb upstream 5.0kb upstream 16945 true scaffold_6: 1939734-1956678 Theobroma cacao
Thecc1EG027158 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1939734-1944733 Theobroma cacao
Thecc1EG027158 5.0kb downstream 5.0kb downstream 16945 true scaffold_6: 1944734-1961678 Theobroma cacao
Thecc1EG027158 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1956679-1961678 Theobroma cacao
Thecc1EG027158 10.0kb upstream 10.0kb upstream 21945 true scaffold_6: 1934734-1956678 Theobroma cacao
Thecc1EG027158 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1934734-1944733 Theobroma cacao
Thecc1EG027158 10.0kb downstream 10.0kb downstream 21945 true scaffold_6: 1944734-1966678 Theobroma cacao
Thecc1EG027158 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1956679-1966678 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835397 5264 Brassicales-Malvales View MSA
124341482 5266 SBM View MSA
124251763 5268 Malvidae View MSA
124060691 5270 Rosid View MSA
123737706 5271 Pentapetalae View MSA
122793552 5272 Eudicot View MSA
122046081 5273 Angiosperm View MSA
121348211 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain