Gene : Thecc1EG027154 T. cacao v1.1
Defline:  (1 of 1) K03025 - DNA-directed RNA polymerase III subunit RPC6 (RPC6, POLR3F) Genomic Order:  215
Name:  ? Thecc1EG027154 Secondary Identifier:  ? PAC:27438407
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027154 0.5kb upstream 0.5kb upstream 3098 true scaffold_6: 1900601-1903698 Theobroma cacao
Thecc1EG027154 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1903199-1903698 Theobroma cacao
Thecc1EG027154 0.5kb downstream 0.5kb downstream 3098 true scaffold_6: 1900101-1903198 Theobroma cacao
Thecc1EG027154 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1900101-1900600 Theobroma cacao
Thecc1EG027154 1.0kb upstream 1.0kb upstream 3598 true scaffold_6: 1900601-1904198 Theobroma cacao
Thecc1EG027154 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1903199-1904198 Theobroma cacao
Thecc1EG027154 1.0kb downstream 1.0kb downstream 3598 true scaffold_6: 1899601-1903198 Theobroma cacao
Thecc1EG027154 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1899601-1900600 Theobroma cacao
Thecc1EG027154 2.0kb upstream 2.0kb upstream 4598 true scaffold_6: 1900601-1905198 Theobroma cacao
Thecc1EG027154 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1903199-1905198 Theobroma cacao
Thecc1EG027154 2.0kb downstream 2.0kb downstream 4598 true scaffold_6: 1898601-1903198 Theobroma cacao
Thecc1EG027154 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1898601-1900600 Theobroma cacao
Thecc1EG027154 5.0kb upstream 5.0kb upstream 7598 true scaffold_6: 1900601-1908198 Theobroma cacao
Thecc1EG027154 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1903199-1908198 Theobroma cacao
Thecc1EG027154 5.0kb downstream 5.0kb downstream 7598 true scaffold_6: 1895601-1903198 Theobroma cacao
Thecc1EG027154 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1895601-1900600 Theobroma cacao
Thecc1EG027154 10.0kb upstream 10.0kb upstream 12598 true scaffold_6: 1900601-1913198 Theobroma cacao
Thecc1EG027154 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1903199-1913198 Theobroma cacao
Thecc1EG027154 10.0kb downstream 10.0kb downstream 12598 true scaffold_6: 1890601-1903198 Theobroma cacao
Thecc1EG027154 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1890601-1900600 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833239 5264 Brassicales-Malvales View MSA
124340164 5266 SBM View MSA
124245053 5268 Malvidae View MSA
124066352 5270 Rosid View MSA
123744384 5271 Pentapetalae View MSA
122788690 5272 Eudicot View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain