Gene : Thecc1EG027140 T. cacao v1.1
Defline:  (1 of 1) K12839 - survival of motor neuron-related-splicing factor 30 (SMNDC1, SPF30) Genomic Order:  202
Name:  ? Thecc1EG027140 Secondary Identifier:  ? PAC:27440295
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027140 0.5kb upstream 0.5kb upstream 5419 true scaffold_6: 1822212-1827630 Theobroma cacao
Thecc1EG027140 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1827131-1827630 Theobroma cacao
Thecc1EG027140 0.5kb downstream 0.5kb downstream 5419 true scaffold_6: 1821712-1827130 Theobroma cacao
Thecc1EG027140 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1821712-1822211 Theobroma cacao
Thecc1EG027140 1.0kb upstream 1.0kb upstream 5919 true scaffold_6: 1822212-1828130 Theobroma cacao
Thecc1EG027140 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1827131-1828130 Theobroma cacao
Thecc1EG027140 1.0kb downstream 1.0kb downstream 5919 true scaffold_6: 1821212-1827130 Theobroma cacao
Thecc1EG027140 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1821212-1822211 Theobroma cacao
Thecc1EG027140 2.0kb upstream 2.0kb upstream 6919 true scaffold_6: 1822212-1829130 Theobroma cacao
Thecc1EG027140 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1827131-1829130 Theobroma cacao
Thecc1EG027140 2.0kb downstream 2.0kb downstream 6919 true scaffold_6: 1820212-1827130 Theobroma cacao
Thecc1EG027140 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1820212-1822211 Theobroma cacao
Thecc1EG027140 5.0kb upstream 5.0kb upstream 9919 true scaffold_6: 1822212-1832130 Theobroma cacao
Thecc1EG027140 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1827131-1832130 Theobroma cacao
Thecc1EG027140 5.0kb downstream 5.0kb downstream 9919 true scaffold_6: 1817212-1827130 Theobroma cacao
Thecc1EG027140 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1817212-1822211 Theobroma cacao
Thecc1EG027140 10.0kb upstream 10.0kb upstream 14919 true scaffold_6: 1822212-1837130 Theobroma cacao
Thecc1EG027140 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1827131-1837130 Theobroma cacao
Thecc1EG027140 10.0kb downstream 10.0kb downstream 14919 true scaffold_6: 1812212-1827130 Theobroma cacao
Thecc1EG027140 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1812212-1822211 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835748 5264 Brassicales-Malvales View MSA
124338720 5266 SBM View MSA
124242162 5268 Malvidae View MSA
124061693 5270 Rosid View MSA
123752320 5271 Pentapetalae View MSA
122796716 5272 Eudicot View MSA
122043131 5273 Angiosperm View MSA
121344735 5274 Embryophyte View MSA
123424972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain