Gene : Pavir.7KG224900 P. virgatum v4.1

Defline:  (1 of 3) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  2023
Name:  ? Pavir.7KG224900 Secondary Identifier:  ? PAC:37683958

Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6126 Panicum virgatum pathologic  
Pvirgatum PWY-7184 Panicum virgatum pathologic  
Pvirgatum PWY-7210 Panicum virgatum pathologic  
Pvirgatum PWY-7211 Panicum virgatum pathologic  
Pvirgatum PWY-7220 Panicum virgatum pathologic  
Pvirgatum PWY-7222 Panicum virgatum pathologic  
Pvirgatum PWY-7226 Panicum virgatum pathologic  
Pvirgatum PWY-7227 Panicum virgatum pathologic  
Pvirgatum PWY-7228 Panicum virgatum pathologic  
Pvirgatum PWY-7229 Panicum virgatum pathologic  
Pvirgatum PWY-841 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7KG224900 0.5kb upstream 0.5kb upstream 2397 true Chr07K: 52994580-52996976 Panicum virgatum
Pavir.7KG224900 0.5kb upstream 0.5kb upstream 500 false Chr07K: 52996477-52996976 Panicum virgatum
Pavir.7KG224900 0.5kb downstream 0.5kb downstream 2397 true Chr07K: 52994080-52996476 Panicum virgatum
Pavir.7KG224900 0.5kb downstream 0.5kb downstream 500 false Chr07K: 52994080-52994579 Panicum virgatum
Pavir.7KG224900 1.0kb upstream 1.0kb upstream 2897 true Chr07K: 52994580-52997476 Panicum virgatum
Pavir.7KG224900 1.0kb upstream 1.0kb upstream 1000 false Chr07K: 52996477-52997476 Panicum virgatum
Pavir.7KG224900 1.0kb downstream 1.0kb downstream 2897 true Chr07K: 52993580-52996476 Panicum virgatum
Pavir.7KG224900 1.0kb downstream 1.0kb downstream 1000 false Chr07K: 52993580-52994579 Panicum virgatum
Pavir.7KG224900 2.0kb upstream 2.0kb upstream 3897 true Chr07K: 52994580-52998476 Panicum virgatum
Pavir.7KG224900 2.0kb upstream 2.0kb upstream 2000 false Chr07K: 52996477-52998476 Panicum virgatum
Pavir.7KG224900 2.0kb downstream 2.0kb downstream 3897 true Chr07K: 52992580-52996476 Panicum virgatum
Pavir.7KG224900 2.0kb downstream 2.0kb downstream 2000 false Chr07K: 52992580-52994579 Panicum virgatum
Pavir.7KG224900 5.0kb upstream 5.0kb upstream 6897 true Chr07K: 52994580-53001476 Panicum virgatum
Pavir.7KG224900 5.0kb upstream 5.0kb upstream 5000 false Chr07K: 52996477-53001476 Panicum virgatum
Pavir.7KG224900 5.0kb downstream 5.0kb downstream 6897 true Chr07K: 52989580-52996476 Panicum virgatum
Pavir.7KG224900 5.0kb downstream 5.0kb downstream 5000 false Chr07K: 52989580-52994579 Panicum virgatum
Pavir.7KG224900 10.0kb upstream 10.0kb upstream 11897 true Chr07K: 52994580-53006476 Panicum virgatum
Pavir.7KG224900 10.0kb upstream 10.0kb upstream 10000 false Chr07K: 52996477-53006476 Panicum virgatum
Pavir.7KG224900 10.0kb downstream 10.0kb downstream 11897 true Chr07K: 52984580-52996476 Panicum virgatum
Pavir.7KG224900 10.0kb downstream 10.0kb downstream 10000 false Chr07K: 52984580-52994579 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193938 5267 Panicoideae View MSA
124585111 5269 Grass View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain