Gene : Thecc1EG027113 T. cacao v1.1
Defline:  (1 of 1) PTHR31384//PTHR31384:SF28 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 1 Genomic Order:  181
Name:  ? Thecc1EG027113 Secondary Identifier:  ? PAC:27439932
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027113 0.5kb upstream 0.5kb upstream 8409 true scaffold_6: 1489825-1498233 Theobroma cacao
Thecc1EG027113 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1497734-1498233 Theobroma cacao
Thecc1EG027113 0.5kb downstream 0.5kb downstream 8409 true scaffold_6: 1489325-1497733 Theobroma cacao
Thecc1EG027113 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1489325-1489824 Theobroma cacao
Thecc1EG027113 1.0kb upstream 1.0kb upstream 8909 true scaffold_6: 1489825-1498733 Theobroma cacao
Thecc1EG027113 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1497734-1498733 Theobroma cacao
Thecc1EG027113 1.0kb downstream 1.0kb downstream 8909 true scaffold_6: 1488825-1497733 Theobroma cacao
Thecc1EG027113 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1488825-1489824 Theobroma cacao
Thecc1EG027113 2.0kb upstream 2.0kb upstream 9909 true scaffold_6: 1489825-1499733 Theobroma cacao
Thecc1EG027113 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1497734-1499733 Theobroma cacao
Thecc1EG027113 2.0kb downstream 2.0kb downstream 9909 true scaffold_6: 1487825-1497733 Theobroma cacao
Thecc1EG027113 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1487825-1489824 Theobroma cacao
Thecc1EG027113 5.0kb upstream 5.0kb upstream 12909 true scaffold_6: 1489825-1502733 Theobroma cacao
Thecc1EG027113 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1497734-1502733 Theobroma cacao
Thecc1EG027113 5.0kb downstream 5.0kb downstream 12909 true scaffold_6: 1484825-1497733 Theobroma cacao
Thecc1EG027113 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1484825-1489824 Theobroma cacao
Thecc1EG027113 10.0kb upstream 10.0kb upstream 17909 true scaffold_6: 1489825-1507733 Theobroma cacao
Thecc1EG027113 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1497734-1507733 Theobroma cacao
Thecc1EG027113 10.0kb downstream 10.0kb downstream 17909 true scaffold_6: 1479825-1497733 Theobroma cacao
Thecc1EG027113 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1479825-1489824 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827866 5264 Brassicales-Malvales View MSA
124345457 5266 SBM View MSA
124240085 5268 Malvidae View MSA
124069092 5270 Rosid View MSA
123739292 5271 Pentapetalae View MSA
122788624 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain