Gene : Pavir.7KG245300 P. virgatum v4.1
Defline:  (1 of 2) PTHR11822:SF5 - ISOCITRATE DEHYDROGENASE [NADP], CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2134
Name:  ? Pavir.7KG245300 Secondary Identifier:  ? PAC:37687752
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6549 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7KG245300 0.5kb upstream 0.5kb upstream 6092 true Chr07K: 53985942-53992033 Panicum virgatum
Pavir.7KG245300 0.5kb upstream 0.5kb upstream 500 false Chr07K: 53985942-53986441 Panicum virgatum
Pavir.7KG245300 0.5kb downstream 0.5kb downstream 6092 true Chr07K: 53986442-53992533 Panicum virgatum
Pavir.7KG245300 0.5kb downstream 0.5kb downstream 500 false Chr07K: 53992034-53992533 Panicum virgatum
Pavir.7KG245300 1.0kb upstream 1.0kb upstream 6592 true Chr07K: 53985442-53992033 Panicum virgatum
Pavir.7KG245300 1.0kb upstream 1.0kb upstream 1000 false Chr07K: 53985442-53986441 Panicum virgatum
Pavir.7KG245300 1.0kb downstream 1.0kb downstream 6592 true Chr07K: 53986442-53993033 Panicum virgatum
Pavir.7KG245300 1.0kb downstream 1.0kb downstream 1000 false Chr07K: 53992034-53993033 Panicum virgatum
Pavir.7KG245300 2.0kb upstream 2.0kb upstream 7592 true Chr07K: 53984442-53992033 Panicum virgatum
Pavir.7KG245300 2.0kb upstream 2.0kb upstream 2000 false Chr07K: 53984442-53986441 Panicum virgatum
Pavir.7KG245300 2.0kb downstream 2.0kb downstream 7592 true Chr07K: 53986442-53994033 Panicum virgatum
Pavir.7KG245300 2.0kb downstream 2.0kb downstream 2000 false Chr07K: 53992034-53994033 Panicum virgatum
Pavir.7KG245300 5.0kb upstream 5.0kb upstream 10592 true Chr07K: 53981442-53992033 Panicum virgatum
Pavir.7KG245300 5.0kb upstream 5.0kb upstream 5000 false Chr07K: 53981442-53986441 Panicum virgatum
Pavir.7KG245300 5.0kb downstream 5.0kb downstream 10592 true Chr07K: 53986442-53997033 Panicum virgatum
Pavir.7KG245300 5.0kb downstream 5.0kb downstream 5000 false Chr07K: 53992034-53997033 Panicum virgatum
Pavir.7KG245300 10.0kb upstream 10.0kb upstream 15592 true Chr07K: 53976442-53992033 Panicum virgatum
Pavir.7KG245300 10.0kb upstream 10.0kb upstream 10000 false Chr07K: 53976442-53986441 Panicum virgatum
Pavir.7KG245300 10.0kb downstream 10.0kb downstream 15592 true Chr07K: 53986442-54002033 Panicum virgatum
Pavir.7KG245300 10.0kb downstream 10.0kb downstream 10000 false Chr07K: 53992034-54002033 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041513 5273 Angiosperm View MSA
122177673 5267 Panicoideae View MSA
124588618 5269 Grass View MSA
121349846 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain