Gene : Thecc1EG027110 T. cacao v1.1
Defline:  (1 of 1) K11664 - vacuolar protein sorting-associated protein 72 (VPS72, TCFL1, YL1) Genomic Order:  179
Name:  ? Thecc1EG027110 Secondary Identifier:  ? PAC:27440675
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027110 0.5kb upstream 0.5kb upstream 6327 true scaffold_6: 1481787-1488113 Theobroma cacao
Thecc1EG027110 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1487614-1488113 Theobroma cacao
Thecc1EG027110 0.5kb downstream 0.5kb downstream 6327 true scaffold_6: 1481287-1487613 Theobroma cacao
Thecc1EG027110 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1481287-1481786 Theobroma cacao
Thecc1EG027110 1.0kb upstream 1.0kb upstream 6827 true scaffold_6: 1481787-1488613 Theobroma cacao
Thecc1EG027110 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1487614-1488613 Theobroma cacao
Thecc1EG027110 1.0kb downstream 1.0kb downstream 6827 true scaffold_6: 1480787-1487613 Theobroma cacao
Thecc1EG027110 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1480787-1481786 Theobroma cacao
Thecc1EG027110 2.0kb upstream 2.0kb upstream 7827 true scaffold_6: 1481787-1489613 Theobroma cacao
Thecc1EG027110 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1487614-1489613 Theobroma cacao
Thecc1EG027110 2.0kb downstream 2.0kb downstream 7827 true scaffold_6: 1479787-1487613 Theobroma cacao
Thecc1EG027110 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1479787-1481786 Theobroma cacao
Thecc1EG027110 5.0kb upstream 5.0kb upstream 10827 true scaffold_6: 1481787-1492613 Theobroma cacao
Thecc1EG027110 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1487614-1492613 Theobroma cacao
Thecc1EG027110 5.0kb downstream 5.0kb downstream 10827 true scaffold_6: 1476787-1487613 Theobroma cacao
Thecc1EG027110 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1476787-1481786 Theobroma cacao
Thecc1EG027110 10.0kb upstream 10.0kb upstream 15827 true scaffold_6: 1481787-1497613 Theobroma cacao
Thecc1EG027110 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1487614-1497613 Theobroma cacao
Thecc1EG027110 10.0kb downstream 10.0kb downstream 15827 true scaffold_6: 1471787-1487613 Theobroma cacao
Thecc1EG027110 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1471787-1481786 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834241 5264 Brassicales-Malvales View MSA
124342342 5266 SBM View MSA
124240169 5268 Malvidae View MSA
124060580 5270 Rosid View MSA
123736798 5271 Pentapetalae View MSA
122788024 5272 Eudicot View MSA
122046393 5273 Angiosperm View MSA
121347831 5274 Embryophyte View MSA
123424205 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain