Gene : Thecc1EG027089 T. cacao v1.1
Defline:  Uncharacterized protein (64%P) Genomic Order:  163
Name:  ? Thecc1EG027089 Secondary Identifier:  ? PAC:27438390
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027089 0.5kb upstream 0.5kb upstream 6763 true scaffold_6: 1349471-1356233 Theobroma cacao
Thecc1EG027089 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1349471-1349970 Theobroma cacao
Thecc1EG027089 0.5kb downstream 0.5kb downstream 6763 true scaffold_6: 1349971-1356733 Theobroma cacao
Thecc1EG027089 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1356234-1356733 Theobroma cacao
Thecc1EG027089 1.0kb upstream 1.0kb upstream 7263 true scaffold_6: 1348971-1356233 Theobroma cacao
Thecc1EG027089 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1348971-1349970 Theobroma cacao
Thecc1EG027089 1.0kb downstream 1.0kb downstream 7263 true scaffold_6: 1349971-1357233 Theobroma cacao
Thecc1EG027089 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1356234-1357233 Theobroma cacao
Thecc1EG027089 2.0kb upstream 2.0kb upstream 8263 true scaffold_6: 1347971-1356233 Theobroma cacao
Thecc1EG027089 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1347971-1349970 Theobroma cacao
Thecc1EG027089 2.0kb downstream 2.0kb downstream 8263 true scaffold_6: 1349971-1358233 Theobroma cacao
Thecc1EG027089 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1356234-1358233 Theobroma cacao
Thecc1EG027089 5.0kb upstream 5.0kb upstream 11263 true scaffold_6: 1344971-1356233 Theobroma cacao
Thecc1EG027089 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1344971-1349970 Theobroma cacao
Thecc1EG027089 5.0kb downstream 5.0kb downstream 11263 true scaffold_6: 1349971-1361233 Theobroma cacao
Thecc1EG027089 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1356234-1361233 Theobroma cacao
Thecc1EG027089 10.0kb upstream 10.0kb upstream 16263 true scaffold_6: 1339971-1356233 Theobroma cacao
Thecc1EG027089 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1339971-1349970 Theobroma cacao
Thecc1EG027089 10.0kb downstream 10.0kb downstream 16263 true scaffold_6: 1349971-1366233 Theobroma cacao
Thecc1EG027089 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1356234-1366233 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657891 5273 Angiosperm View MSA
123825240 5264 Brassicales-Malvales View MSA
124320517 5266 SBM View MSA
124253043 5268 Malvidae View MSA
124040436 5270 Rosid View MSA
123611839 5271 Pentapetalae View MSA
122646381 5272 Eudicot View MSA
120929916 5274 Embryophyte View MSA
122970464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain