Gene : Thecc1EG027074 T. cacao v1.1
Defline:  (1 of 33) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  147
Name:  ? Thecc1EG027074 Secondary Identifier:  ? PAC:27439111
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027074 0.5kb upstream 0.5kb upstream 4876 true scaffold_6: 1247235-1252110 Theobroma cacao
Thecc1EG027074 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1247235-1247734 Theobroma cacao
Thecc1EG027074 0.5kb downstream 0.5kb downstream 4876 true scaffold_6: 1247735-1252610 Theobroma cacao
Thecc1EG027074 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1252111-1252610 Theobroma cacao
Thecc1EG027074 1.0kb upstream 1.0kb upstream 5376 true scaffold_6: 1246735-1252110 Theobroma cacao
Thecc1EG027074 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1246735-1247734 Theobroma cacao
Thecc1EG027074 1.0kb downstream 1.0kb downstream 5376 true scaffold_6: 1247735-1253110 Theobroma cacao
Thecc1EG027074 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1252111-1253110 Theobroma cacao
Thecc1EG027074 2.0kb upstream 2.0kb upstream 6376 true scaffold_6: 1245735-1252110 Theobroma cacao
Thecc1EG027074 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1245735-1247734 Theobroma cacao
Thecc1EG027074 2.0kb downstream 2.0kb downstream 6376 true scaffold_6: 1247735-1254110 Theobroma cacao
Thecc1EG027074 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1252111-1254110 Theobroma cacao
Thecc1EG027074 5.0kb upstream 5.0kb upstream 9376 true scaffold_6: 1242735-1252110 Theobroma cacao
Thecc1EG027074 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1242735-1247734 Theobroma cacao
Thecc1EG027074 5.0kb downstream 5.0kb downstream 9376 true scaffold_6: 1247735-1257110 Theobroma cacao
Thecc1EG027074 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1252111-1257110 Theobroma cacao
Thecc1EG027074 10.0kb upstream 10.0kb upstream 14376 true scaffold_6: 1237735-1252110 Theobroma cacao
Thecc1EG027074 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1237735-1247734 Theobroma cacao
Thecc1EG027074 10.0kb downstream 10.0kb downstream 14376 true scaffold_6: 1247735-1262110 Theobroma cacao
Thecc1EG027074 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1252111-1262110 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836663 5264 Brassicales-Malvales View MSA
124350887 5266 SBM View MSA
124245179 5268 Malvidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain