Gene : Thecc1EG027499 T. cacao v1.1
Defline:  (1 of 18) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  437
Name:  ? Thecc1EG027499 Secondary Identifier:  ? PAC:27440574
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  
Tcacao PWY-6040 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027499 0.5kb upstream 0.5kb upstream 6811 true scaffold_6: 4449229-4456039 Theobroma cacao
Thecc1EG027499 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4449229-4449728 Theobroma cacao
Thecc1EG027499 0.5kb downstream 0.5kb downstream 6811 true scaffold_6: 4449729-4456539 Theobroma cacao
Thecc1EG027499 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4456040-4456539 Theobroma cacao
Thecc1EG027499 1.0kb upstream 1.0kb upstream 7311 true scaffold_6: 4448729-4456039 Theobroma cacao
Thecc1EG027499 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4448729-4449728 Theobroma cacao
Thecc1EG027499 1.0kb downstream 1.0kb downstream 7311 true scaffold_6: 4449729-4457039 Theobroma cacao
Thecc1EG027499 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4456040-4457039 Theobroma cacao
Thecc1EG027499 2.0kb upstream 2.0kb upstream 8311 true scaffold_6: 4447729-4456039 Theobroma cacao
Thecc1EG027499 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4447729-4449728 Theobroma cacao
Thecc1EG027499 2.0kb downstream 2.0kb downstream 8311 true scaffold_6: 4449729-4458039 Theobroma cacao
Thecc1EG027499 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4456040-4458039 Theobroma cacao
Thecc1EG027499 5.0kb upstream 5.0kb upstream 11311 true scaffold_6: 4444729-4456039 Theobroma cacao
Thecc1EG027499 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4444729-4449728 Theobroma cacao
Thecc1EG027499 5.0kb downstream 5.0kb downstream 11311 true scaffold_6: 4449729-4461039 Theobroma cacao
Thecc1EG027499 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4456040-4461039 Theobroma cacao
Thecc1EG027499 10.0kb upstream 10.0kb upstream 16311 true scaffold_6: 4439729-4456039 Theobroma cacao
Thecc1EG027499 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4439729-4449728 Theobroma cacao
Thecc1EG027499 10.0kb downstream 10.0kb downstream 16311 true scaffold_6: 4449729-4466039 Theobroma cacao
Thecc1EG027499 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4456040-4466039 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837697 5264 Brassicales-Malvales View MSA
124343720 5266 SBM View MSA
124250027 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain