Gene : Thecc1EG027410 T. cacao v1.1
Defline:  (1 of 1) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  384
Name:  ? Thecc1EG027410 Secondary Identifier:  ? PAC:27441064
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027410 0.5kb upstream 0.5kb upstream 11977 true scaffold_6: 3676999-3688975 Theobroma cacao
Thecc1EG027410 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3688476-3688975 Theobroma cacao
Thecc1EG027410 0.5kb downstream 0.5kb downstream 11977 true scaffold_6: 3676499-3688475 Theobroma cacao
Thecc1EG027410 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3676499-3676998 Theobroma cacao
Thecc1EG027410 1.0kb upstream 1.0kb upstream 12477 true scaffold_6: 3676999-3689475 Theobroma cacao
Thecc1EG027410 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3688476-3689475 Theobroma cacao
Thecc1EG027410 1.0kb downstream 1.0kb downstream 12477 true scaffold_6: 3675999-3688475 Theobroma cacao
Thecc1EG027410 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3675999-3676998 Theobroma cacao
Thecc1EG027410 2.0kb upstream 2.0kb upstream 13477 true scaffold_6: 3676999-3690475 Theobroma cacao
Thecc1EG027410 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3688476-3690475 Theobroma cacao
Thecc1EG027410 2.0kb downstream 2.0kb downstream 13477 true scaffold_6: 3674999-3688475 Theobroma cacao
Thecc1EG027410 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3674999-3676998 Theobroma cacao
Thecc1EG027410 5.0kb upstream 5.0kb upstream 16477 true scaffold_6: 3676999-3693475 Theobroma cacao
Thecc1EG027410 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3688476-3693475 Theobroma cacao
Thecc1EG027410 5.0kb downstream 5.0kb downstream 16477 true scaffold_6: 3671999-3688475 Theobroma cacao
Thecc1EG027410 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3671999-3676998 Theobroma cacao
Thecc1EG027410 10.0kb upstream 10.0kb upstream 21477 true scaffold_6: 3676999-3698475 Theobroma cacao
Thecc1EG027410 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3688476-3698475 Theobroma cacao
Thecc1EG027410 10.0kb downstream 10.0kb downstream 21477 true scaffold_6: 3666999-3688475 Theobroma cacao
Thecc1EG027410 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3666999-3676998 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831643 5264 Brassicales-Malvales View MSA
124345778 5266 SBM View MSA
124237586 5268 Malvidae View MSA
124060440 5270 Rosid View MSA
123737600 5271 Pentapetalae View MSA
122792763 5272 Eudicot View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain