Gene : Thecc1EG027409 T. cacao v1.1
Defline:  (1 of 1) PTHR21094//PTHR21094:SF1 - GOS-28 SNARE- RELATED // GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-1 Genomic Order:  383
Name:  ? Thecc1EG027409 Secondary Identifier:  ? PAC:27439339
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027409 0.5kb upstream 0.5kb upstream 5888 true scaffold_6: 3669341-3675228 Theobroma cacao
Thecc1EG027409 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3674729-3675228 Theobroma cacao
Thecc1EG027409 0.5kb downstream 0.5kb downstream 5888 true scaffold_6: 3668841-3674728 Theobroma cacao
Thecc1EG027409 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3668841-3669340 Theobroma cacao
Thecc1EG027409 1.0kb upstream 1.0kb upstream 6388 true scaffold_6: 3669341-3675728 Theobroma cacao
Thecc1EG027409 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3674729-3675728 Theobroma cacao
Thecc1EG027409 1.0kb downstream 1.0kb downstream 6388 true scaffold_6: 3668341-3674728 Theobroma cacao
Thecc1EG027409 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3668341-3669340 Theobroma cacao
Thecc1EG027409 2.0kb upstream 2.0kb upstream 7388 true scaffold_6: 3669341-3676728 Theobroma cacao
Thecc1EG027409 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3674729-3676728 Theobroma cacao
Thecc1EG027409 2.0kb downstream 2.0kb downstream 7388 true scaffold_6: 3667341-3674728 Theobroma cacao
Thecc1EG027409 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3667341-3669340 Theobroma cacao
Thecc1EG027409 5.0kb upstream 5.0kb upstream 10388 true scaffold_6: 3669341-3679728 Theobroma cacao
Thecc1EG027409 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3674729-3679728 Theobroma cacao
Thecc1EG027409 5.0kb downstream 5.0kb downstream 10388 true scaffold_6: 3664341-3674728 Theobroma cacao
Thecc1EG027409 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3664341-3669340 Theobroma cacao
Thecc1EG027409 10.0kb upstream 10.0kb upstream 15388 true scaffold_6: 3669341-3684728 Theobroma cacao
Thecc1EG027409 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3674729-3684728 Theobroma cacao
Thecc1EG027409 10.0kb downstream 10.0kb downstream 15388 true scaffold_6: 3659341-3674728 Theobroma cacao
Thecc1EG027409 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3659341-3669340 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828692 5264 Brassicales-Malvales View MSA
124344469 5266 SBM View MSA
124240881 5268 Malvidae View MSA
124071161 5270 Rosid View MSA
123751408 5271 Pentapetalae View MSA
122787730 5272 Eudicot View MSA
122044900 5273 Angiosperm View MSA
121348787 5274 Embryophyte View MSA
123427960 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain