Gene : Thecc1EG027382 T. cacao v1.1

Defline:  Uncharacterized protein Genomic Order:  365
Name:  ? Thecc1EG027382 Secondary Identifier:  ? PAC:27438484

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027382 0.5kb upstream 0.5kb upstream 5318 true scaffold_6: 3465745-3471062 Theobroma cacao
Thecc1EG027382 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3470563-3471062 Theobroma cacao
Thecc1EG027382 0.5kb downstream 0.5kb downstream 5318 true scaffold_6: 3465245-3470562 Theobroma cacao
Thecc1EG027382 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3465245-3465744 Theobroma cacao
Thecc1EG027382 1.0kb upstream 1.0kb upstream 5818 true scaffold_6: 3465745-3471562 Theobroma cacao
Thecc1EG027382 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3470563-3471562 Theobroma cacao
Thecc1EG027382 1.0kb downstream 1.0kb downstream 5818 true scaffold_6: 3464745-3470562 Theobroma cacao
Thecc1EG027382 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3464745-3465744 Theobroma cacao
Thecc1EG027382 2.0kb upstream 2.0kb upstream 6818 true scaffold_6: 3465745-3472562 Theobroma cacao
Thecc1EG027382 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3470563-3472562 Theobroma cacao
Thecc1EG027382 2.0kb downstream 2.0kb downstream 6818 true scaffold_6: 3463745-3470562 Theobroma cacao
Thecc1EG027382 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3463745-3465744 Theobroma cacao
Thecc1EG027382 5.0kb upstream 5.0kb upstream 9818 true scaffold_6: 3465745-3475562 Theobroma cacao
Thecc1EG027382 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3470563-3475562 Theobroma cacao
Thecc1EG027382 5.0kb downstream 5.0kb downstream 9818 true scaffold_6: 3460745-3470562 Theobroma cacao
Thecc1EG027382 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3460745-3465744 Theobroma cacao
Thecc1EG027382 10.0kb upstream 10.0kb upstream 14818 true scaffold_6: 3465745-3480562 Theobroma cacao
Thecc1EG027382 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3470563-3480562 Theobroma cacao
Thecc1EG027382 10.0kb downstream 10.0kb downstream 14818 true scaffold_6: 3455745-3470562 Theobroma cacao
Thecc1EG027382 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3455745-3465744 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839662 5264 Brassicales-Malvales View MSA
124322632 5266 SBM View MSA
124252686 5268 Malvidae View MSA
124070731 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain