Gene : Thecc1EG027328 T. cacao v1.1
Defline:  (1 of 1) PTHR31414//PTHR31414:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN DDB_G0292058 Genomic Order:  338
Name:  ? Thecc1EG027328 Secondary Identifier:  ? PAC:27438470
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027328 0.5kb upstream 0.5kb upstream 4006 true scaffold_6: 3031537-3035542 Theobroma cacao
Thecc1EG027328 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3035043-3035542 Theobroma cacao
Thecc1EG027328 0.5kb downstream 0.5kb downstream 4006 true scaffold_6: 3031037-3035042 Theobroma cacao
Thecc1EG027328 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3031037-3031536 Theobroma cacao
Thecc1EG027328 1.0kb upstream 1.0kb upstream 4506 true scaffold_6: 3031537-3036042 Theobroma cacao
Thecc1EG027328 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3035043-3036042 Theobroma cacao
Thecc1EG027328 1.0kb downstream 1.0kb downstream 4506 true scaffold_6: 3030537-3035042 Theobroma cacao
Thecc1EG027328 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3030537-3031536 Theobroma cacao
Thecc1EG027328 2.0kb upstream 2.0kb upstream 5506 true scaffold_6: 3031537-3037042 Theobroma cacao
Thecc1EG027328 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3035043-3037042 Theobroma cacao
Thecc1EG027328 2.0kb downstream 2.0kb downstream 5506 true scaffold_6: 3029537-3035042 Theobroma cacao
Thecc1EG027328 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3029537-3031536 Theobroma cacao
Thecc1EG027328 5.0kb upstream 5.0kb upstream 8506 true scaffold_6: 3031537-3040042 Theobroma cacao
Thecc1EG027328 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3035043-3040042 Theobroma cacao
Thecc1EG027328 5.0kb downstream 5.0kb downstream 8506 true scaffold_6: 3026537-3035042 Theobroma cacao
Thecc1EG027328 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3026537-3031536 Theobroma cacao
Thecc1EG027328 10.0kb upstream 10.0kb upstream 13506 true scaffold_6: 3031537-3045042 Theobroma cacao
Thecc1EG027328 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3035043-3045042 Theobroma cacao
Thecc1EG027328 10.0kb downstream 10.0kb downstream 13506 true scaffold_6: 3021537-3035042 Theobroma cacao
Thecc1EG027328 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3021537-3031536 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839550 5264 Brassicales-Malvales View MSA
124344666 5266 SBM View MSA
124246122 5268 Malvidae View MSA
124069186 5270 Rosid View MSA
123747530 5271 Pentapetalae View MSA
122793265 5272 Eudicot View MSA
122043467 5273 Angiosperm View MSA
123429125 5275 Viridiplantae View MSA
121350323 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain