Gene : Thecc1EG027333 T. cacao v1.1
Defline:  (1 of 61) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  340
Name:  ? Thecc1EG027333 Secondary Identifier:  ? PAC:27438684
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027333 0.5kb upstream 0.5kb upstream 2966 true scaffold_6: 3054312-3057277 Theobroma cacao
Thecc1EG027333 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3056778-3057277 Theobroma cacao
Thecc1EG027333 0.5kb downstream 0.5kb downstream 2966 true scaffold_6: 3053812-3056777 Theobroma cacao
Thecc1EG027333 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3053812-3054311 Theobroma cacao
Thecc1EG027333 1.0kb upstream 1.0kb upstream 3466 true scaffold_6: 3054312-3057777 Theobroma cacao
Thecc1EG027333 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3056778-3057777 Theobroma cacao
Thecc1EG027333 1.0kb downstream 1.0kb downstream 3466 true scaffold_6: 3053312-3056777 Theobroma cacao
Thecc1EG027333 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3053312-3054311 Theobroma cacao
Thecc1EG027333 2.0kb upstream 2.0kb upstream 4466 true scaffold_6: 3054312-3058777 Theobroma cacao
Thecc1EG027333 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3056778-3058777 Theobroma cacao
Thecc1EG027333 2.0kb downstream 2.0kb downstream 4466 true scaffold_6: 3052312-3056777 Theobroma cacao
Thecc1EG027333 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3052312-3054311 Theobroma cacao
Thecc1EG027333 5.0kb upstream 5.0kb upstream 7466 true scaffold_6: 3054312-3061777 Theobroma cacao
Thecc1EG027333 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3056778-3061777 Theobroma cacao
Thecc1EG027333 5.0kb downstream 5.0kb downstream 7466 true scaffold_6: 3049312-3056777 Theobroma cacao
Thecc1EG027333 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3049312-3054311 Theobroma cacao
Thecc1EG027333 10.0kb upstream 10.0kb upstream 12466 true scaffold_6: 3054312-3066777 Theobroma cacao
Thecc1EG027333 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3056778-3066777 Theobroma cacao
Thecc1EG027333 10.0kb downstream 10.0kb downstream 12466 true scaffold_6: 3044312-3056777 Theobroma cacao
Thecc1EG027333 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3044312-3054311 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837227 5264 Brassicales-Malvales View MSA
124348535 5266 SBM View MSA
124237197 5268 Malvidae View MSA
124063690 5270 Rosid View MSA
123747336 5271 Pentapetalae View MSA
122785819 5272 Eudicot View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain