Gene : Thecc1EG027346 T. cacao v1.1
Defline:  (1 of 1) 2.6.1.11 - Acetylornithine transaminase / Succinylornithine aminotransferase Genomic Order:  347
Name:  ? Thecc1EG027346 Secondary Identifier:  ? PAC:27439089
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARGSYNBSUB-PWY Theobroma cacao pathologic  
Tcacao ARGSYN-PWY Theobroma cacao pathologic  
Tcacao GLUTORN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027346 0.5kb upstream 0.5kb upstream 3675 true scaffold_6: 3146859-3150533 Theobroma cacao
Thecc1EG027346 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3146859-3147358 Theobroma cacao
Thecc1EG027346 0.5kb downstream 0.5kb downstream 3675 true scaffold_6: 3147359-3151033 Theobroma cacao
Thecc1EG027346 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3150534-3151033 Theobroma cacao
Thecc1EG027346 1.0kb upstream 1.0kb upstream 4175 true scaffold_6: 3146359-3150533 Theobroma cacao
Thecc1EG027346 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3146359-3147358 Theobroma cacao
Thecc1EG027346 1.0kb downstream 1.0kb downstream 4175 true scaffold_6: 3147359-3151533 Theobroma cacao
Thecc1EG027346 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3150534-3151533 Theobroma cacao
Thecc1EG027346 2.0kb upstream 2.0kb upstream 5175 true scaffold_6: 3145359-3150533 Theobroma cacao
Thecc1EG027346 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3145359-3147358 Theobroma cacao
Thecc1EG027346 2.0kb downstream 2.0kb downstream 5175 true scaffold_6: 3147359-3152533 Theobroma cacao
Thecc1EG027346 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3150534-3152533 Theobroma cacao
Thecc1EG027346 5.0kb upstream 5.0kb upstream 8175 true scaffold_6: 3142359-3150533 Theobroma cacao
Thecc1EG027346 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3142359-3147358 Theobroma cacao
Thecc1EG027346 5.0kb downstream 5.0kb downstream 8175 true scaffold_6: 3147359-3155533 Theobroma cacao
Thecc1EG027346 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3150534-3155533 Theobroma cacao
Thecc1EG027346 10.0kb upstream 10.0kb upstream 13175 true scaffold_6: 3137359-3150533 Theobroma cacao
Thecc1EG027346 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3137359-3147358 Theobroma cacao
Thecc1EG027346 10.0kb downstream 10.0kb downstream 13175 true scaffold_6: 3147359-3160533 Theobroma cacao
Thecc1EG027346 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3150534-3160533 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839882 5264 Brassicales-Malvales View MSA
124344979 5266 SBM View MSA
124239289 5268 Malvidae View MSA
124071750 5270 Rosid View MSA
123736750 5271 Pentapetalae View MSA
122787472 5272 Eudicot View MSA
122044767 5273 Angiosperm View MSA
121344135 5274 Embryophyte View MSA
123424486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain