Gene : Thecc1EG027308 T. cacao v1.1
Defline:  (1 of 5) PF07647 - SAM domain (Sterile alpha motif) (SAM_2) Genomic Order:  325
Name:  ? Thecc1EG027308 Secondary Identifier:  ? PAC:27437790
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027308 0.5kb upstream 0.5kb upstream 1620 true scaffold_6: 2877098-2878717 Theobroma cacao
Thecc1EG027308 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2877098-2877597 Theobroma cacao
Thecc1EG027308 0.5kb downstream 0.5kb downstream 1620 true scaffold_6: 2877598-2879217 Theobroma cacao
Thecc1EG027308 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2878718-2879217 Theobroma cacao
Thecc1EG027308 1.0kb upstream 1.0kb upstream 2120 true scaffold_6: 2876598-2878717 Theobroma cacao
Thecc1EG027308 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2876598-2877597 Theobroma cacao
Thecc1EG027308 1.0kb downstream 1.0kb downstream 2120 true scaffold_6: 2877598-2879717 Theobroma cacao
Thecc1EG027308 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2878718-2879717 Theobroma cacao
Thecc1EG027308 2.0kb upstream 2.0kb upstream 3120 true scaffold_6: 2875598-2878717 Theobroma cacao
Thecc1EG027308 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2875598-2877597 Theobroma cacao
Thecc1EG027308 2.0kb downstream 2.0kb downstream 3120 true scaffold_6: 2877598-2880717 Theobroma cacao
Thecc1EG027308 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2878718-2880717 Theobroma cacao
Thecc1EG027308 5.0kb upstream 5.0kb upstream 6120 true scaffold_6: 2872598-2878717 Theobroma cacao
Thecc1EG027308 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2872598-2877597 Theobroma cacao
Thecc1EG027308 5.0kb downstream 5.0kb downstream 6120 true scaffold_6: 2877598-2883717 Theobroma cacao
Thecc1EG027308 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2878718-2883717 Theobroma cacao
Thecc1EG027308 10.0kb upstream 10.0kb upstream 11120 true scaffold_6: 2867598-2878717 Theobroma cacao
Thecc1EG027308 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2867598-2877597 Theobroma cacao
Thecc1EG027308 10.0kb downstream 10.0kb downstream 11120 true scaffold_6: 2877598-2888717 Theobroma cacao
Thecc1EG027308 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2878718-2888717 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839675 5264 Brassicales-Malvales View MSA
124344189 5266 SBM View MSA
124242329 5268 Malvidae View MSA
124063066 5270 Rosid View MSA
123745428 5271 Pentapetalae View MSA
122789154 5272 Eudicot View MSA
122048035 5273 Angiosperm View MSA
121310835 5274 Embryophyte View MSA
123348222 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain