Gene : Thecc1EG027290 T. cacao v1.1
Defline:  (1 of 1) PTHR11811//PTHR11811:SF35 - 6-PHOSPHOGLUCONATE DEHYDROGENASE // AROGENATE DEHYDROGENASE 2, CHLOROPLASTIC Genomic Order:  309
Name:  ? Thecc1EG027290 Secondary Identifier:  ? PAC:27440751
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3461 Theobroma cacao pathologic  
Tcacao PWY-3481 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027290 0.5kb upstream 0.5kb upstream 4823 true scaffold_6: 2755532-2760354 Theobroma cacao
Thecc1EG027290 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2755532-2756031 Theobroma cacao
Thecc1EG027290 0.5kb downstream 0.5kb downstream 4823 true scaffold_6: 2756032-2760854 Theobroma cacao
Thecc1EG027290 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2760355-2760854 Theobroma cacao
Thecc1EG027290 1.0kb upstream 1.0kb upstream 5323 true scaffold_6: 2755032-2760354 Theobroma cacao
Thecc1EG027290 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2755032-2756031 Theobroma cacao
Thecc1EG027290 1.0kb downstream 1.0kb downstream 5323 true scaffold_6: 2756032-2761354 Theobroma cacao
Thecc1EG027290 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2760355-2761354 Theobroma cacao
Thecc1EG027290 2.0kb upstream 2.0kb upstream 6323 true scaffold_6: 2754032-2760354 Theobroma cacao
Thecc1EG027290 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2754032-2756031 Theobroma cacao
Thecc1EG027290 2.0kb downstream 2.0kb downstream 6323 true scaffold_6: 2756032-2762354 Theobroma cacao
Thecc1EG027290 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2760355-2762354 Theobroma cacao
Thecc1EG027290 5.0kb upstream 5.0kb upstream 9323 true scaffold_6: 2751032-2760354 Theobroma cacao
Thecc1EG027290 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2751032-2756031 Theobroma cacao
Thecc1EG027290 5.0kb downstream 5.0kb downstream 9323 true scaffold_6: 2756032-2765354 Theobroma cacao
Thecc1EG027290 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2760355-2765354 Theobroma cacao
Thecc1EG027290 10.0kb upstream 10.0kb upstream 14323 true scaffold_6: 2746032-2760354 Theobroma cacao
Thecc1EG027290 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2746032-2756031 Theobroma cacao
Thecc1EG027290 10.0kb downstream 10.0kb downstream 14323 true scaffold_6: 2756032-2770354 Theobroma cacao
Thecc1EG027290 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2760355-2770354 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830710 5264 Brassicales-Malvales View MSA
124346336 5266 SBM View MSA
124247308 5268 Malvidae View MSA
124070774 5270 Rosid View MSA
123749744 5271 Pentapetalae View MSA
122797141 5272 Eudicot View MSA
122050819 5273 Angiosperm View MSA
121351682 5274 Embryophyte View MSA
123427304 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain