Gene : Thecc1EG027293 T. cacao v1.1

Defline:  (1 of 1) PTHR34948//PTHR34948:SF2 - FAMILY NOT NAMED // TRIPHOSPHATE TUNEL METALLOENZYME 3 Genomic Order:  312
Name:  ? Thecc1EG027293 Secondary Identifier:  ? PAC:27440279

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027293 0.5kb upstream 0.5kb upstream 2011 true scaffold_6: 2776952-2778962 Theobroma cacao
Thecc1EG027293 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2776952-2777451 Theobroma cacao
Thecc1EG027293 0.5kb downstream 0.5kb downstream 2011 true scaffold_6: 2777452-2779462 Theobroma cacao
Thecc1EG027293 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2778963-2779462 Theobroma cacao
Thecc1EG027293 1.0kb upstream 1.0kb upstream 2511 true scaffold_6: 2776452-2778962 Theobroma cacao
Thecc1EG027293 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2776452-2777451 Theobroma cacao
Thecc1EG027293 1.0kb downstream 1.0kb downstream 2511 true scaffold_6: 2777452-2779962 Theobroma cacao
Thecc1EG027293 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2778963-2779962 Theobroma cacao
Thecc1EG027293 2.0kb upstream 2.0kb upstream 3511 true scaffold_6: 2775452-2778962 Theobroma cacao
Thecc1EG027293 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2775452-2777451 Theobroma cacao
Thecc1EG027293 2.0kb downstream 2.0kb downstream 3511 true scaffold_6: 2777452-2780962 Theobroma cacao
Thecc1EG027293 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2778963-2780962 Theobroma cacao
Thecc1EG027293 5.0kb upstream 5.0kb upstream 6511 true scaffold_6: 2772452-2778962 Theobroma cacao
Thecc1EG027293 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2772452-2777451 Theobroma cacao
Thecc1EG027293 5.0kb downstream 5.0kb downstream 6511 true scaffold_6: 2777452-2783962 Theobroma cacao
Thecc1EG027293 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2778963-2783962 Theobroma cacao
Thecc1EG027293 10.0kb upstream 10.0kb upstream 11511 true scaffold_6: 2767452-2778962 Theobroma cacao
Thecc1EG027293 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2767452-2777451 Theobroma cacao
Thecc1EG027293 10.0kb downstream 10.0kb downstream 11511 true scaffold_6: 2777452-2788962 Theobroma cacao
Thecc1EG027293 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2778963-2788962 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824286 5264 Brassicales-Malvales View MSA
124349529 5266 SBM View MSA
124246775 5268 Malvidae View MSA
124070070 5270 Rosid View MSA
123747724 5271 Pentapetalae View MSA
122786251 5272 Eudicot View MSA
122047583 5273 Angiosperm View MSA
121347010 5274 Embryophyte View MSA
123425047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain