Gene : Thecc1EG027799 T. cacao v1.1
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  573
Name:  ? Thecc1EG027799 Secondary Identifier:  ? PAC:27440135
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2541 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027799 0.5kb upstream 0.5kb upstream 44253 true scaffold_6: 7380053-7424305 Theobroma cacao
Thecc1EG027799 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7423806-7424305 Theobroma cacao
Thecc1EG027799 0.5kb downstream 0.5kb downstream 44253 true scaffold_6: 7379553-7423805 Theobroma cacao
Thecc1EG027799 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7379553-7380052 Theobroma cacao
Thecc1EG027799 1.0kb upstream 1.0kb upstream 44753 true scaffold_6: 7380053-7424805 Theobroma cacao
Thecc1EG027799 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7423806-7424805 Theobroma cacao
Thecc1EG027799 1.0kb downstream 1.0kb downstream 44753 true scaffold_6: 7379053-7423805 Theobroma cacao
Thecc1EG027799 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7379053-7380052 Theobroma cacao
Thecc1EG027799 2.0kb upstream 2.0kb upstream 45753 true scaffold_6: 7380053-7425805 Theobroma cacao
Thecc1EG027799 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7423806-7425805 Theobroma cacao
Thecc1EG027799 2.0kb downstream 2.0kb downstream 45753 true scaffold_6: 7378053-7423805 Theobroma cacao
Thecc1EG027799 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7378053-7380052 Theobroma cacao
Thecc1EG027799 5.0kb upstream 5.0kb upstream 48753 true scaffold_6: 7380053-7428805 Theobroma cacao
Thecc1EG027799 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7423806-7428805 Theobroma cacao
Thecc1EG027799 5.0kb downstream 5.0kb downstream 48753 true scaffold_6: 7375053-7423805 Theobroma cacao
Thecc1EG027799 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7375053-7380052 Theobroma cacao
Thecc1EG027799 10.0kb upstream 10.0kb upstream 53753 true scaffold_6: 7380053-7433805 Theobroma cacao
Thecc1EG027799 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7423806-7433805 Theobroma cacao
Thecc1EG027799 10.0kb downstream 10.0kb downstream 53753 true scaffold_6: 7370053-7423805 Theobroma cacao
Thecc1EG027799 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7370053-7380052 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831848 5264 Brassicales-Malvales View MSA
124345945 5266 SBM View MSA
124241398 5268 Malvidae View MSA
124066966 5270 Rosid View MSA
123738626 5271 Pentapetalae View MSA
122793044 5272 Eudicot View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain