Gene : Thecc1EG027783 T. cacao v1.1
Defline:  (1 of 1) K03009 - DNA-directed RNA polymerases I, II, and III subunit RPABC4 (RPB12, POLR2K) Genomic Order:  565
Name:  ? Thecc1EG027783 Secondary Identifier:  ? PAC:27439178
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027783 0.5kb upstream 0.5kb upstream 3546 true scaffold_6: 7229428-7232973 Theobroma cacao
Thecc1EG027783 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7232474-7232973 Theobroma cacao
Thecc1EG027783 0.5kb downstream 0.5kb downstream 3546 true scaffold_6: 7228928-7232473 Theobroma cacao
Thecc1EG027783 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7228928-7229427 Theobroma cacao
Thecc1EG027783 1.0kb upstream 1.0kb upstream 4046 true scaffold_6: 7229428-7233473 Theobroma cacao
Thecc1EG027783 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7232474-7233473 Theobroma cacao
Thecc1EG027783 1.0kb downstream 1.0kb downstream 4046 true scaffold_6: 7228428-7232473 Theobroma cacao
Thecc1EG027783 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7228428-7229427 Theobroma cacao
Thecc1EG027783 2.0kb upstream 2.0kb upstream 5046 true scaffold_6: 7229428-7234473 Theobroma cacao
Thecc1EG027783 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7232474-7234473 Theobroma cacao
Thecc1EG027783 2.0kb downstream 2.0kb downstream 5046 true scaffold_6: 7227428-7232473 Theobroma cacao
Thecc1EG027783 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7227428-7229427 Theobroma cacao
Thecc1EG027783 5.0kb upstream 5.0kb upstream 8046 true scaffold_6: 7229428-7237473 Theobroma cacao
Thecc1EG027783 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7232474-7237473 Theobroma cacao
Thecc1EG027783 5.0kb downstream 5.0kb downstream 8046 true scaffold_6: 7224428-7232473 Theobroma cacao
Thecc1EG027783 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7224428-7229427 Theobroma cacao
Thecc1EG027783 10.0kb upstream 10.0kb upstream 13046 true scaffold_6: 7229428-7242473 Theobroma cacao
Thecc1EG027783 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7232474-7242473 Theobroma cacao
Thecc1EG027783 10.0kb downstream 10.0kb downstream 13046 true scaffold_6: 7219428-7232473 Theobroma cacao
Thecc1EG027783 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7219428-7229427 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026326 5273 Angiosperm View MSA
123835471 5264 Brassicales-Malvales View MSA
124344678 5266 SBM View MSA
124238298 5268 Malvidae View MSA
124074526 5270 Rosid View MSA
123750212 5271 Pentapetalae View MSA
122790378 5272 Eudicot View MSA
121345650 5274 Embryophyte View MSA
123426861 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain