Gene : Pavir.7NG222700 P. virgatum v4.1
Defline:  (1 of 2) K00231 - oxygen-dependent protoporphyrinogen oxidase (PPOX, hemY) Genomic Order:  2206
Name:  ? Pavir.7NG222700 Secondary Identifier:  ? PAC:37618585
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CHLOROPHYLL-SYN Panicum virgatum pathologic  
Pvirgatum HEME-BIOSYNTHESIS-II Panicum virgatum pathologic  
Pvirgatum PWY-5918 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7NG222700 0.5kb upstream 0.5kb upstream 6546 true Chr07N: 50007614-50014159 Panicum virgatum
Pavir.7NG222700 0.5kb upstream 0.5kb upstream 500 false Chr07N: 50007614-50008113 Panicum virgatum
Pavir.7NG222700 0.5kb downstream 0.5kb downstream 6546 true Chr07N: 50008114-50014659 Panicum virgatum
Pavir.7NG222700 0.5kb downstream 0.5kb downstream 500 false Chr07N: 50014160-50014659 Panicum virgatum
Pavir.7NG222700 1.0kb upstream 1.0kb upstream 7046 true Chr07N: 50007114-50014159 Panicum virgatum
Pavir.7NG222700 1.0kb upstream 1.0kb upstream 1000 false Chr07N: 50007114-50008113 Panicum virgatum
Pavir.7NG222700 1.0kb downstream 1.0kb downstream 7046 true Chr07N: 50008114-50015159 Panicum virgatum
Pavir.7NG222700 1.0kb downstream 1.0kb downstream 1000 false Chr07N: 50014160-50015159 Panicum virgatum
Pavir.7NG222700 2.0kb upstream 2.0kb upstream 8046 true Chr07N: 50006114-50014159 Panicum virgatum
Pavir.7NG222700 2.0kb upstream 2.0kb upstream 2000 false Chr07N: 50006114-50008113 Panicum virgatum
Pavir.7NG222700 2.0kb downstream 2.0kb downstream 8046 true Chr07N: 50008114-50016159 Panicum virgatum
Pavir.7NG222700 2.0kb downstream 2.0kb downstream 2000 false Chr07N: 50014160-50016159 Panicum virgatum
Pavir.7NG222700 5.0kb upstream 5.0kb upstream 11046 true Chr07N: 50003114-50014159 Panicum virgatum
Pavir.7NG222700 5.0kb upstream 5.0kb upstream 5000 false Chr07N: 50003114-50008113 Panicum virgatum
Pavir.7NG222700 5.0kb downstream 5.0kb downstream 11046 true Chr07N: 50008114-50019159 Panicum virgatum
Pavir.7NG222700 5.0kb downstream 5.0kb downstream 5000 false Chr07N: 50014160-50019159 Panicum virgatum
Pavir.7NG222700 10.0kb upstream 10.0kb upstream 16046 true Chr07N: 49998114-50014159 Panicum virgatum
Pavir.7NG222700 10.0kb upstream 10.0kb upstream 10000 false Chr07N: 49998114-50008113 Panicum virgatum
Pavir.7NG222700 10.0kb downstream 10.0kb downstream 16046 true Chr07N: 50008114-50024159 Panicum virgatum
Pavir.7NG222700 10.0kb downstream 10.0kb downstream 10000 false Chr07N: 50014160-50024159 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175388 5267 Panicoideae View MSA
124571496 5269 Grass View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain