Gene : Thecc1EG027759 T. cacao v1.1
Defline:  (1 of 1) PTHR11079//PTHR11079:SF74 - CYTOSINE DEAMINASE // RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  552
Name:  ? Thecc1EG027759 Secondary Identifier:  ? PAC:27440575
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027759 0.5kb upstream 0.5kb upstream 5228 true scaffold_6: 6977469-6982696 Theobroma cacao
Thecc1EG027759 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6982197-6982696 Theobroma cacao
Thecc1EG027759 0.5kb downstream 0.5kb downstream 5228 true scaffold_6: 6976969-6982196 Theobroma cacao
Thecc1EG027759 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6976969-6977468 Theobroma cacao
Thecc1EG027759 1.0kb upstream 1.0kb upstream 5728 true scaffold_6: 6977469-6983196 Theobroma cacao
Thecc1EG027759 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6982197-6983196 Theobroma cacao
Thecc1EG027759 1.0kb downstream 1.0kb downstream 5728 true scaffold_6: 6976469-6982196 Theobroma cacao
Thecc1EG027759 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6976469-6977468 Theobroma cacao
Thecc1EG027759 2.0kb upstream 2.0kb upstream 6728 true scaffold_6: 6977469-6984196 Theobroma cacao
Thecc1EG027759 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6982197-6984196 Theobroma cacao
Thecc1EG027759 2.0kb downstream 2.0kb downstream 6728 true scaffold_6: 6975469-6982196 Theobroma cacao
Thecc1EG027759 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6975469-6977468 Theobroma cacao
Thecc1EG027759 5.0kb upstream 5.0kb upstream 9728 true scaffold_6: 6977469-6987196 Theobroma cacao
Thecc1EG027759 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6982197-6987196 Theobroma cacao
Thecc1EG027759 5.0kb downstream 5.0kb downstream 9728 true scaffold_6: 6972469-6982196 Theobroma cacao
Thecc1EG027759 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6972469-6977468 Theobroma cacao
Thecc1EG027759 10.0kb upstream 10.0kb upstream 14728 true scaffold_6: 6977469-6992196 Theobroma cacao
Thecc1EG027759 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6982197-6992196 Theobroma cacao
Thecc1EG027759 10.0kb downstream 10.0kb downstream 14728 true scaffold_6: 6967469-6982196 Theobroma cacao
Thecc1EG027759 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6967469-6977468 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827527 5264 Brassicales-Malvales View MSA
124337282 5266 SBM View MSA
124240463 5268 Malvidae View MSA
124068142 5270 Rosid View MSA
123740880 5271 Pentapetalae View MSA
122787515 5272 Eudicot View MSA
122044797 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain