Gene : Thecc1EG027696 T. cacao v1.1
Defline:  (1 of 2) PTHR22762//PTHR22762:SF82 - ALPHA-GLUCOSIDASE // PROTEIN AAGR-1 Genomic Order:  519
Name:  ? Thecc1EG027696 Secondary Identifier:  ? PAC:27440195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027696 0.5kb upstream 0.5kb upstream 72284 true scaffold_6: 6265421-6337704 Theobroma cacao
Thecc1EG027696 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6337205-6337704 Theobroma cacao
Thecc1EG027696 0.5kb downstream 0.5kb downstream 72284 true scaffold_6: 6264921-6337204 Theobroma cacao
Thecc1EG027696 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6264921-6265420 Theobroma cacao
Thecc1EG027696 1.0kb upstream 1.0kb upstream 72784 true scaffold_6: 6265421-6338204 Theobroma cacao
Thecc1EG027696 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6337205-6338204 Theobroma cacao
Thecc1EG027696 1.0kb downstream 1.0kb downstream 72784 true scaffold_6: 6264421-6337204 Theobroma cacao
Thecc1EG027696 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6264421-6265420 Theobroma cacao
Thecc1EG027696 2.0kb upstream 2.0kb upstream 73784 true scaffold_6: 6265421-6339204 Theobroma cacao
Thecc1EG027696 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6337205-6339204 Theobroma cacao
Thecc1EG027696 2.0kb downstream 2.0kb downstream 73784 true scaffold_6: 6263421-6337204 Theobroma cacao
Thecc1EG027696 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6263421-6265420 Theobroma cacao
Thecc1EG027696 5.0kb upstream 5.0kb upstream 76784 true scaffold_6: 6265421-6342204 Theobroma cacao
Thecc1EG027696 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6337205-6342204 Theobroma cacao
Thecc1EG027696 5.0kb downstream 5.0kb downstream 76784 true scaffold_6: 6260421-6337204 Theobroma cacao
Thecc1EG027696 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6260421-6265420 Theobroma cacao
Thecc1EG027696 10.0kb upstream 10.0kb upstream 81784 true scaffold_6: 6265421-6347204 Theobroma cacao
Thecc1EG027696 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6337205-6347204 Theobroma cacao
Thecc1EG027696 10.0kb downstream 10.0kb downstream 81784 true scaffold_6: 6255421-6337204 Theobroma cacao
Thecc1EG027696 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6255421-6265420 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123821205 5264 Brassicales-Malvales Singleton cluster - no MSA
124317392 5266 SBM Singleton cluster - no MSA
124166127 5268 Malvidae Singleton cluster - no MSA
123889750 5270 Rosid Singleton cluster - no MSA
123748401 5271 Pentapetalae View MSA
122786472 5272 Eudicot View MSA
122047200 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain