Gene : Pavir.7NG273200 P. virgatum v4.1
Defline:  (1 of 1) 1.13.11.71 - Carotenoid-9',10'-cleaving dioxygenase / Beta-carotene 9',10'-monooxygenase Genomic Order:  2765
Name:  ? Pavir.7NG273200 Secondary Identifier:  ? PAC:37619861
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7101 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7NG273200 0.5kb upstream 0.5kb upstream 3142 true Chr07N: 57485687-57488828 Panicum virgatum
Pavir.7NG273200 0.5kb upstream 0.5kb upstream 500 false Chr07N: 57485687-57486186 Panicum virgatum
Pavir.7NG273200 0.5kb downstream 0.5kb downstream 3142 true Chr07N: 57486187-57489328 Panicum virgatum
Pavir.7NG273200 0.5kb downstream 0.5kb downstream 500 false Chr07N: 57488829-57489328 Panicum virgatum
Pavir.7NG273200 1.0kb upstream 1.0kb upstream 3642 true Chr07N: 57485187-57488828 Panicum virgatum
Pavir.7NG273200 1.0kb upstream 1.0kb upstream 1000 false Chr07N: 57485187-57486186 Panicum virgatum
Pavir.7NG273200 1.0kb downstream 1.0kb downstream 3642 true Chr07N: 57486187-57489828 Panicum virgatum
Pavir.7NG273200 1.0kb downstream 1.0kb downstream 1000 false Chr07N: 57488829-57489828 Panicum virgatum
Pavir.7NG273200 2.0kb upstream 2.0kb upstream 4642 true Chr07N: 57484187-57488828 Panicum virgatum
Pavir.7NG273200 2.0kb upstream 2.0kb upstream 2000 false Chr07N: 57484187-57486186 Panicum virgatum
Pavir.7NG273200 2.0kb downstream 2.0kb downstream 4642 true Chr07N: 57486187-57490828 Panicum virgatum
Pavir.7NG273200 2.0kb downstream 2.0kb downstream 2000 false Chr07N: 57488829-57490828 Panicum virgatum
Pavir.7NG273200 5.0kb upstream 5.0kb upstream 7642 true Chr07N: 57481187-57488828 Panicum virgatum
Pavir.7NG273200 5.0kb upstream 5.0kb upstream 5000 false Chr07N: 57481187-57486186 Panicum virgatum
Pavir.7NG273200 5.0kb downstream 5.0kb downstream 7642 true Chr07N: 57486187-57493828 Panicum virgatum
Pavir.7NG273200 5.0kb downstream 5.0kb downstream 5000 false Chr07N: 57488829-57493828 Panicum virgatum
Pavir.7NG273200 10.0kb upstream 10.0kb upstream 12642 true Chr07N: 57476187-57488828 Panicum virgatum
Pavir.7NG273200 10.0kb upstream 10.0kb upstream 10000 false Chr07N: 57476187-57486186 Panicum virgatum
Pavir.7NG273200 10.0kb downstream 10.0kb downstream 12642 true Chr07N: 57486187-57498828 Panicum virgatum
Pavir.7NG273200 10.0kb downstream 10.0kb downstream 10000 false Chr07N: 57488829-57498828 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122091049 5267 Panicoideae Singleton cluster - no MSA
124388573 5269 Grass Singleton cluster - no MSA
122047914 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344181 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain