Gene : Thecc1EG027608 T. cacao v1.1
Defline:  (1 of 2) PTHR31642//PTHR31642:SF6 - FAMILY NOT NAMED // HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  491
Name:  ? Thecc1EG027608 Secondary Identifier:  ? PAC:27439948
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4203 Theobroma cacao pathologic  
Tcacao PWY-5835 Theobroma cacao pathologic  
Tcacao PWY-6801 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027608 0.5kb upstream 0.5kb upstream 3621 true scaffold_6: 5399506-5403126 Theobroma cacao
Thecc1EG027608 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5399506-5400005 Theobroma cacao
Thecc1EG027608 0.5kb downstream 0.5kb downstream 3621 true scaffold_6: 5400006-5403626 Theobroma cacao
Thecc1EG027608 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5403127-5403626 Theobroma cacao
Thecc1EG027608 1.0kb upstream 1.0kb upstream 4121 true scaffold_6: 5399006-5403126 Theobroma cacao
Thecc1EG027608 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5399006-5400005 Theobroma cacao
Thecc1EG027608 1.0kb downstream 1.0kb downstream 4121 true scaffold_6: 5400006-5404126 Theobroma cacao
Thecc1EG027608 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5403127-5404126 Theobroma cacao
Thecc1EG027608 2.0kb upstream 2.0kb upstream 5121 true scaffold_6: 5398006-5403126 Theobroma cacao
Thecc1EG027608 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5398006-5400005 Theobroma cacao
Thecc1EG027608 2.0kb downstream 2.0kb downstream 5121 true scaffold_6: 5400006-5405126 Theobroma cacao
Thecc1EG027608 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5403127-5405126 Theobroma cacao
Thecc1EG027608 5.0kb upstream 5.0kb upstream 8121 true scaffold_6: 5395006-5403126 Theobroma cacao
Thecc1EG027608 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5395006-5400005 Theobroma cacao
Thecc1EG027608 5.0kb downstream 5.0kb downstream 8121 true scaffold_6: 5400006-5408126 Theobroma cacao
Thecc1EG027608 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5403127-5408126 Theobroma cacao
Thecc1EG027608 10.0kb upstream 10.0kb upstream 13121 true scaffold_6: 5390006-5403126 Theobroma cacao
Thecc1EG027608 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5390006-5400005 Theobroma cacao
Thecc1EG027608 10.0kb downstream 10.0kb downstream 13121 true scaffold_6: 5400006-5413126 Theobroma cacao
Thecc1EG027608 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5403127-5413126 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831825 5264 Brassicales-Malvales View MSA
124349768 5266 SBM View MSA
124247936 5268 Malvidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain