Gene : Thecc1EG027624 T. cacao v1.1
Defline:  (1 of 1) PTHR32166:SF20 - HAT TRANSPOSON SUPERFAMILY PROTEIN Genomic Order:  497
Name:  ? Thecc1EG027624 Secondary Identifier:  ? PAC:27438612
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027624 0.5kb upstream 0.5kb upstream 6387 true scaffold_6: 5548368-5554754 Theobroma cacao
Thecc1EG027624 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5554255-5554754 Theobroma cacao
Thecc1EG027624 0.5kb downstream 0.5kb downstream 6387 true scaffold_6: 5547868-5554254 Theobroma cacao
Thecc1EG027624 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5547868-5548367 Theobroma cacao
Thecc1EG027624 1.0kb upstream 1.0kb upstream 6887 true scaffold_6: 5548368-5555254 Theobroma cacao
Thecc1EG027624 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5554255-5555254 Theobroma cacao
Thecc1EG027624 1.0kb downstream 1.0kb downstream 6887 true scaffold_6: 5547368-5554254 Theobroma cacao
Thecc1EG027624 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5547368-5548367 Theobroma cacao
Thecc1EG027624 2.0kb upstream 2.0kb upstream 7887 true scaffold_6: 5548368-5556254 Theobroma cacao
Thecc1EG027624 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5554255-5556254 Theobroma cacao
Thecc1EG027624 2.0kb downstream 2.0kb downstream 7887 true scaffold_6: 5546368-5554254 Theobroma cacao
Thecc1EG027624 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5546368-5548367 Theobroma cacao
Thecc1EG027624 5.0kb upstream 5.0kb upstream 10887 true scaffold_6: 5548368-5559254 Theobroma cacao
Thecc1EG027624 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5554255-5559254 Theobroma cacao
Thecc1EG027624 5.0kb downstream 5.0kb downstream 10887 true scaffold_6: 5543368-5554254 Theobroma cacao
Thecc1EG027624 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5543368-5548367 Theobroma cacao
Thecc1EG027624 10.0kb upstream 10.0kb upstream 15887 true scaffold_6: 5548368-5564254 Theobroma cacao
Thecc1EG027624 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5554255-5564254 Theobroma cacao
Thecc1EG027624 10.0kb downstream 10.0kb downstream 15887 true scaffold_6: 5538368-5554254 Theobroma cacao
Thecc1EG027624 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5538368-5548367 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832953 5264 Brassicales-Malvales View MSA
124321835 5266 SBM View MSA
124242529 5268 Malvidae View MSA
124050464 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain