Gene : Pavir.7NG396100 P. virgatum v4.1
Defline:  (1 of 6) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED Genomic Order:  3380
Name:  ? Pavir.7NG396100 Secondary Identifier:  ? PAC:37620537
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.7NG396100 0.5kb upstream 0.5kb upstream 2850 true Chr07N: 63817153-63820002 Panicum virgatum
Pavir.7NG396100 0.5kb upstream 0.5kb upstream 500 false Chr07N: 63817153-63817652 Panicum virgatum
Pavir.7NG396100 0.5kb downstream 0.5kb downstream 2850 true Chr07N: 63817653-63820502 Panicum virgatum
Pavir.7NG396100 0.5kb downstream 0.5kb downstream 500 false Chr07N: 63820003-63820502 Panicum virgatum
Pavir.7NG396100 1.0kb upstream 1.0kb upstream 3350 true Chr07N: 63816653-63820002 Panicum virgatum
Pavir.7NG396100 1.0kb upstream 1.0kb upstream 1000 false Chr07N: 63816653-63817652 Panicum virgatum
Pavir.7NG396100 1.0kb downstream 1.0kb downstream 3350 true Chr07N: 63817653-63821002 Panicum virgatum
Pavir.7NG396100 1.0kb downstream 1.0kb downstream 1000 false Chr07N: 63820003-63821002 Panicum virgatum
Pavir.7NG396100 2.0kb upstream 2.0kb upstream 4350 true Chr07N: 63815653-63820002 Panicum virgatum
Pavir.7NG396100 2.0kb upstream 2.0kb upstream 2000 false Chr07N: 63815653-63817652 Panicum virgatum
Pavir.7NG396100 2.0kb downstream 2.0kb downstream 4350 true Chr07N: 63817653-63822002 Panicum virgatum
Pavir.7NG396100 2.0kb downstream 2.0kb downstream 2000 false Chr07N: 63820003-63822002 Panicum virgatum
Pavir.7NG396100 5.0kb upstream 5.0kb upstream 7350 true Chr07N: 63812653-63820002 Panicum virgatum
Pavir.7NG396100 5.0kb upstream 5.0kb upstream 5000 false Chr07N: 63812653-63817652 Panicum virgatum
Pavir.7NG396100 5.0kb downstream 5.0kb downstream 7350 true Chr07N: 63817653-63825002 Panicum virgatum
Pavir.7NG396100 5.0kb downstream 5.0kb downstream 5000 false Chr07N: 63820003-63825002 Panicum virgatum
Pavir.7NG396100 10.0kb upstream 10.0kb upstream 12350 true Chr07N: 63807653-63820002 Panicum virgatum
Pavir.7NG396100 10.0kb upstream 10.0kb upstream 10000 false Chr07N: 63807653-63817652 Panicum virgatum
Pavir.7NG396100 10.0kb downstream 10.0kb downstream 12350 true Chr07N: 63817653-63830002 Panicum virgatum
Pavir.7NG396100 10.0kb downstream 10.0kb downstream 10000 false Chr07N: 63820003-63830002 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032115 5273 Angiosperm View MSA
122091243 5267 Panicoideae Singleton cluster - no MSA
124388754 5269 Grass Singleton cluster - no MSA
121301054 5274 Embryophyte View MSA
123338745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain