Gene : Thecc1EG028287 T. cacao v1.1
Defline:  (1 of 1) PTHR19851:SF7 - PROTEIN K06A9.2 Genomic Order:  713
Name:  ? Thecc1EG028287 Secondary Identifier:  ? PAC:27440783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028287 0.5kb upstream 0.5kb upstream 14369 true scaffold_6: 13281619-13295987 Theobroma cacao
Thecc1EG028287 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13295488-13295987 Theobroma cacao
Thecc1EG028287 0.5kb downstream 0.5kb downstream 14369 true scaffold_6: 13281119-13295487 Theobroma cacao
Thecc1EG028287 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13281119-13281618 Theobroma cacao
Thecc1EG028287 1.0kb upstream 1.0kb upstream 14869 true scaffold_6: 13281619-13296487 Theobroma cacao
Thecc1EG028287 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13295488-13296487 Theobroma cacao
Thecc1EG028287 1.0kb downstream 1.0kb downstream 14869 true scaffold_6: 13280619-13295487 Theobroma cacao
Thecc1EG028287 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13280619-13281618 Theobroma cacao
Thecc1EG028287 2.0kb upstream 2.0kb upstream 15869 true scaffold_6: 13281619-13297487 Theobroma cacao
Thecc1EG028287 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13295488-13297487 Theobroma cacao
Thecc1EG028287 2.0kb downstream 2.0kb downstream 15869 true scaffold_6: 13279619-13295487 Theobroma cacao
Thecc1EG028287 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13279619-13281618 Theobroma cacao
Thecc1EG028287 5.0kb upstream 5.0kb upstream 18869 true scaffold_6: 13281619-13300487 Theobroma cacao
Thecc1EG028287 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13295488-13300487 Theobroma cacao
Thecc1EG028287 5.0kb downstream 5.0kb downstream 18869 true scaffold_6: 13276619-13295487 Theobroma cacao
Thecc1EG028287 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13276619-13281618 Theobroma cacao
Thecc1EG028287 10.0kb upstream 10.0kb upstream 23869 true scaffold_6: 13281619-13305487 Theobroma cacao
Thecc1EG028287 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13295488-13305487 Theobroma cacao
Thecc1EG028287 10.0kb downstream 10.0kb downstream 23869 true scaffold_6: 13271619-13295487 Theobroma cacao
Thecc1EG028287 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13271619-13281618 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123821295 5264 Brassicales-Malvales Singleton cluster - no MSA
124347344 5266 SBM View MSA
124245440 5268 Malvidae View MSA
124073552 5270 Rosid View MSA
123628377 5271 Pentapetalae View MSA
122662655 5272 Eudicot View MSA
122049058 5273 Angiosperm View MSA
121311228 5274 Embryophyte View MSA
123348552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain