Gene : Thecc1EG028275 T. cacao v1.1
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  706
Name:  ? Thecc1EG028275 Secondary Identifier:  ? PAC:27439198
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028275 0.5kb upstream 0.5kb upstream 15462 true scaffold_6: 13202306-13217767 Theobroma cacao
Thecc1EG028275 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 13217268-13217767 Theobroma cacao
Thecc1EG028275 0.5kb downstream 0.5kb downstream 15462 true scaffold_6: 13201806-13217267 Theobroma cacao
Thecc1EG028275 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 13201806-13202305 Theobroma cacao
Thecc1EG028275 1.0kb upstream 1.0kb upstream 15962 true scaffold_6: 13202306-13218267 Theobroma cacao
Thecc1EG028275 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 13217268-13218267 Theobroma cacao
Thecc1EG028275 1.0kb downstream 1.0kb downstream 15962 true scaffold_6: 13201306-13217267 Theobroma cacao
Thecc1EG028275 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 13201306-13202305 Theobroma cacao
Thecc1EG028275 2.0kb upstream 2.0kb upstream 16962 true scaffold_6: 13202306-13219267 Theobroma cacao
Thecc1EG028275 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 13217268-13219267 Theobroma cacao
Thecc1EG028275 2.0kb downstream 2.0kb downstream 16962 true scaffold_6: 13200306-13217267 Theobroma cacao
Thecc1EG028275 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 13200306-13202305 Theobroma cacao
Thecc1EG028275 5.0kb upstream 5.0kb upstream 19962 true scaffold_6: 13202306-13222267 Theobroma cacao
Thecc1EG028275 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 13217268-13222267 Theobroma cacao
Thecc1EG028275 5.0kb downstream 5.0kb downstream 19962 true scaffold_6: 13197306-13217267 Theobroma cacao
Thecc1EG028275 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 13197306-13202305 Theobroma cacao
Thecc1EG028275 10.0kb upstream 10.0kb upstream 24962 true scaffold_6: 13202306-13227267 Theobroma cacao
Thecc1EG028275 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 13217268-13227267 Theobroma cacao
Thecc1EG028275 10.0kb downstream 10.0kb downstream 24962 true scaffold_6: 13192306-13217267 Theobroma cacao
Thecc1EG028275 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 13192306-13202305 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840805 5264 Brassicales-Malvales View MSA
124348914 5266 SBM View MSA
124244692 5268 Malvidae View MSA
124069839 5270 Rosid View MSA
123746410 5271 Pentapetalae View MSA
122795069 5272 Eudicot View MSA
122048129 5273 Angiosperm View MSA
121310856 5274 Embryophyte View MSA
123348241 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain