Gene : Thecc1EG028731 T. cacao v1.1
Defline:  (1 of 2) PTHR12161//PTHR12161:SF14 - UNCHARACTERIZED DUF292 // REGULATOR OF VPS4 Genomic Order:  895
Name:  ? Thecc1EG028731 Secondary Identifier:  ? PAC:27439446
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028731 0.5kb upstream 0.5kb upstream 4982 true scaffold_6: 17761843-17766824 Theobroma cacao
Thecc1EG028731 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 17766325-17766824 Theobroma cacao
Thecc1EG028731 0.5kb downstream 0.5kb downstream 4982 true scaffold_6: 17761343-17766324 Theobroma cacao
Thecc1EG028731 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 17761343-17761842 Theobroma cacao
Thecc1EG028731 1.0kb upstream 1.0kb upstream 5482 true scaffold_6: 17761843-17767324 Theobroma cacao
Thecc1EG028731 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 17766325-17767324 Theobroma cacao
Thecc1EG028731 1.0kb downstream 1.0kb downstream 5482 true scaffold_6: 17760843-17766324 Theobroma cacao
Thecc1EG028731 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 17760843-17761842 Theobroma cacao
Thecc1EG028731 2.0kb upstream 2.0kb upstream 6482 true scaffold_6: 17761843-17768324 Theobroma cacao
Thecc1EG028731 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 17766325-17768324 Theobroma cacao
Thecc1EG028731 2.0kb downstream 2.0kb downstream 6482 true scaffold_6: 17759843-17766324 Theobroma cacao
Thecc1EG028731 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 17759843-17761842 Theobroma cacao
Thecc1EG028731 5.0kb upstream 5.0kb upstream 9482 true scaffold_6: 17761843-17771324 Theobroma cacao
Thecc1EG028731 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 17766325-17771324 Theobroma cacao
Thecc1EG028731 5.0kb downstream 5.0kb downstream 9482 true scaffold_6: 17756843-17766324 Theobroma cacao
Thecc1EG028731 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 17756843-17761842 Theobroma cacao
Thecc1EG028731 10.0kb upstream 10.0kb upstream 14482 true scaffold_6: 17761843-17776324 Theobroma cacao
Thecc1EG028731 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 17766325-17776324 Theobroma cacao
Thecc1EG028731 10.0kb downstream 10.0kb downstream 14482 true scaffold_6: 17751843-17766324 Theobroma cacao
Thecc1EG028731 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 17751843-17761842 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836535 5264 Brassicales-Malvales View MSA
124349092 5266 SBM View MSA
124249863 5268 Malvidae View MSA
124066649 5270 Rosid View MSA
123746994 5271 Pentapetalae View MSA
122787378 5272 Eudicot View MSA
122041860 5273 Angiosperm View MSA
121351542 5274 Embryophyte View MSA
123382216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain