Gene : Pavir.8NG039700 P. virgatum v4.1
Defline:  (1 of 136) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  372
Name:  ? Pavir.8NG039700 Secondary Identifier:  ? PAC:37623857
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG039700 0.5kb upstream 0.5kb upstream 1742 true Chr08N: 5022761-5024502 Panicum virgatum
Pavir.8NG039700 0.5kb upstream 0.5kb upstream 500 false Chr08N: 5022761-5023260 Panicum virgatum
Pavir.8NG039700 0.5kb downstream 0.5kb downstream 1742 true Chr08N: 5023261-5025002 Panicum virgatum
Pavir.8NG039700 0.5kb downstream 0.5kb downstream 500 false Chr08N: 5024503-5025002 Panicum virgatum
Pavir.8NG039700 1.0kb upstream 1.0kb upstream 2242 true Chr08N: 5022261-5024502 Panicum virgatum
Pavir.8NG039700 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 5022261-5023260 Panicum virgatum
Pavir.8NG039700 1.0kb downstream 1.0kb downstream 2242 true Chr08N: 5023261-5025502 Panicum virgatum
Pavir.8NG039700 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 5024503-5025502 Panicum virgatum
Pavir.8NG039700 2.0kb upstream 2.0kb upstream 3242 true Chr08N: 5021261-5024502 Panicum virgatum
Pavir.8NG039700 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 5021261-5023260 Panicum virgatum
Pavir.8NG039700 2.0kb downstream 2.0kb downstream 3242 true Chr08N: 5023261-5026502 Panicum virgatum
Pavir.8NG039700 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 5024503-5026502 Panicum virgatum
Pavir.8NG039700 5.0kb upstream 5.0kb upstream 6242 true Chr08N: 5018261-5024502 Panicum virgatum
Pavir.8NG039700 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 5018261-5023260 Panicum virgatum
Pavir.8NG039700 5.0kb downstream 5.0kb downstream 6242 true Chr08N: 5023261-5029502 Panicum virgatum
Pavir.8NG039700 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 5024503-5029502 Panicum virgatum
Pavir.8NG039700 10.0kb upstream 10.0kb upstream 11242 true Chr08N: 5013261-5024502 Panicum virgatum
Pavir.8NG039700 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 5013261-5023260 Panicum virgatum
Pavir.8NG039700 10.0kb downstream 10.0kb downstream 11242 true Chr08N: 5023261-5034502 Panicum virgatum
Pavir.8NG039700 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 5024503-5034502 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122092155 5267 Panicoideae Singleton cluster - no MSA
124585832 5269 Grass View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

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