Gene : Pavir.8NG038300 P. virgatum v4.1
Defline:  (1 of 2) PF02018//PF06964 - Carbohydrate binding domain (CBM_4_9) // Alpha-L-arabinofuranosidase C-terminus (Alpha-L-AF_C) Genomic Order:  359
Name:  ? Pavir.8NG038300 Secondary Identifier:  ? PAC:37625896
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG038300 0.5kb upstream 0.5kb upstream 7445 true Chr08N: 4935112-4942556 Panicum virgatum
Pavir.8NG038300 0.5kb upstream 0.5kb upstream 500 false Chr08N: 4942057-4942556 Panicum virgatum
Pavir.8NG038300 0.5kb downstream 0.5kb downstream 7445 true Chr08N: 4934612-4942056 Panicum virgatum
Pavir.8NG038300 0.5kb downstream 0.5kb downstream 500 false Chr08N: 4934612-4935111 Panicum virgatum
Pavir.8NG038300 1.0kb upstream 1.0kb upstream 7945 true Chr08N: 4935112-4943056 Panicum virgatum
Pavir.8NG038300 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 4942057-4943056 Panicum virgatum
Pavir.8NG038300 1.0kb downstream 1.0kb downstream 7945 true Chr08N: 4934112-4942056 Panicum virgatum
Pavir.8NG038300 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 4934112-4935111 Panicum virgatum
Pavir.8NG038300 2.0kb upstream 2.0kb upstream 8945 true Chr08N: 4935112-4944056 Panicum virgatum
Pavir.8NG038300 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 4942057-4944056 Panicum virgatum
Pavir.8NG038300 2.0kb downstream 2.0kb downstream 8945 true Chr08N: 4933112-4942056 Panicum virgatum
Pavir.8NG038300 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 4933112-4935111 Panicum virgatum
Pavir.8NG038300 5.0kb upstream 5.0kb upstream 11945 true Chr08N: 4935112-4947056 Panicum virgatum
Pavir.8NG038300 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 4942057-4947056 Panicum virgatum
Pavir.8NG038300 5.0kb downstream 5.0kb downstream 11945 true Chr08N: 4930112-4942056 Panicum virgatum
Pavir.8NG038300 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 4930112-4935111 Panicum virgatum
Pavir.8NG038300 10.0kb upstream 10.0kb upstream 16945 true Chr08N: 4935112-4952056 Panicum virgatum
Pavir.8NG038300 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 4942057-4952056 Panicum virgatum
Pavir.8NG038300 10.0kb downstream 10.0kb downstream 16945 true Chr08N: 4925112-4942056 Panicum virgatum
Pavir.8NG038300 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 4925112-4935111 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192842 5267 Panicoideae View MSA
124578027 5269 Grass View MSA
122044822 5273 Angiosperm View MSA
121344375 5274 Embryophyte View MSA
123428022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain