Gene : Thecc1EG028697 T. cacao v1.1
Defline:  (1 of 2) PTHR11467:SF50 - HISTONE H1 Genomic Order:  876
Name:  ? Thecc1EG028697 Secondary Identifier:  ? PAC:27438235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028697 0.5kb upstream 0.5kb upstream 2549 true scaffold_6: 17556884-17559432 Theobroma cacao
Thecc1EG028697 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 17558933-17559432 Theobroma cacao
Thecc1EG028697 0.5kb downstream 0.5kb downstream 2549 true scaffold_6: 17556384-17558932 Theobroma cacao
Thecc1EG028697 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 17556384-17556883 Theobroma cacao
Thecc1EG028697 1.0kb upstream 1.0kb upstream 3049 true scaffold_6: 17556884-17559932 Theobroma cacao
Thecc1EG028697 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 17558933-17559932 Theobroma cacao
Thecc1EG028697 1.0kb downstream 1.0kb downstream 3049 true scaffold_6: 17555884-17558932 Theobroma cacao
Thecc1EG028697 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 17555884-17556883 Theobroma cacao
Thecc1EG028697 2.0kb upstream 2.0kb upstream 4049 true scaffold_6: 17556884-17560932 Theobroma cacao
Thecc1EG028697 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 17558933-17560932 Theobroma cacao
Thecc1EG028697 2.0kb downstream 2.0kb downstream 4049 true scaffold_6: 17554884-17558932 Theobroma cacao
Thecc1EG028697 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 17554884-17556883 Theobroma cacao
Thecc1EG028697 5.0kb upstream 5.0kb upstream 7049 true scaffold_6: 17556884-17563932 Theobroma cacao
Thecc1EG028697 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 17558933-17563932 Theobroma cacao
Thecc1EG028697 5.0kb downstream 5.0kb downstream 7049 true scaffold_6: 17551884-17558932 Theobroma cacao
Thecc1EG028697 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 17551884-17556883 Theobroma cacao
Thecc1EG028697 10.0kb upstream 10.0kb upstream 12049 true scaffold_6: 17556884-17568932 Theobroma cacao
Thecc1EG028697 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 17558933-17568932 Theobroma cacao
Thecc1EG028697 10.0kb downstream 10.0kb downstream 12049 true scaffold_6: 17546884-17558932 Theobroma cacao
Thecc1EG028697 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 17546884-17556883 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836027 5264 Brassicales-Malvales View MSA
124339991 5266 SBM View MSA
124240558 5268 Malvidae View MSA
124060845 5270 Rosid View MSA
123737715 5271 Pentapetalae View MSA
122789903 5272 Eudicot View MSA
122050605 5273 Angiosperm View MSA
121312020 5274 Embryophyte View MSA
123349235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain