Gene : Thecc1EG028612 T. cacao v1.1
Defline:  (1 of 1) K10803 - DNA-repair protein XRCC1 (XRCC1) Genomic Order:  837
Name:  ? Thecc1EG028612 Secondary Identifier:  ? PAC:27440956
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028612 0.5kb upstream 0.5kb upstream 7895 true scaffold_6: 16799190-16807084 Theobroma cacao
Thecc1EG028612 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16806585-16807084 Theobroma cacao
Thecc1EG028612 0.5kb downstream 0.5kb downstream 7895 true scaffold_6: 16798690-16806584 Theobroma cacao
Thecc1EG028612 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16798690-16799189 Theobroma cacao
Thecc1EG028612 1.0kb upstream 1.0kb upstream 8395 true scaffold_6: 16799190-16807584 Theobroma cacao
Thecc1EG028612 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16806585-16807584 Theobroma cacao
Thecc1EG028612 1.0kb downstream 1.0kb downstream 8395 true scaffold_6: 16798190-16806584 Theobroma cacao
Thecc1EG028612 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16798190-16799189 Theobroma cacao
Thecc1EG028612 2.0kb upstream 2.0kb upstream 9395 true scaffold_6: 16799190-16808584 Theobroma cacao
Thecc1EG028612 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16806585-16808584 Theobroma cacao
Thecc1EG028612 2.0kb downstream 2.0kb downstream 9395 true scaffold_6: 16797190-16806584 Theobroma cacao
Thecc1EG028612 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16797190-16799189 Theobroma cacao
Thecc1EG028612 5.0kb upstream 5.0kb upstream 12395 true scaffold_6: 16799190-16811584 Theobroma cacao
Thecc1EG028612 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16806585-16811584 Theobroma cacao
Thecc1EG028612 5.0kb downstream 5.0kb downstream 12395 true scaffold_6: 16794190-16806584 Theobroma cacao
Thecc1EG028612 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16794190-16799189 Theobroma cacao
Thecc1EG028612 10.0kb upstream 10.0kb upstream 17395 true scaffold_6: 16799190-16816584 Theobroma cacao
Thecc1EG028612 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16806585-16816584 Theobroma cacao
Thecc1EG028612 10.0kb downstream 10.0kb downstream 17395 true scaffold_6: 16789190-16806584 Theobroma cacao
Thecc1EG028612 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16789190-16799189 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834439 5264 Brassicales-Malvales View MSA
124342643 5266 SBM View MSA
124244372 5268 Malvidae View MSA
124064277 5270 Rosid View MSA
123745081 5271 Pentapetalae View MSA
122790473 5272 Eudicot View MSA
122046298 5273 Angiosperm View MSA
121347821 5274 Embryophyte View MSA
123380641 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain