Gene : Thecc1EG028602 T. cacao v1.1
Defline:  (1 of 1) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED Genomic Order:  830
Name:  ? Thecc1EG028602 Secondary Identifier:  ? PAC:27438928
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028602 0.5kb upstream 0.5kb upstream 3622 true scaffold_6: 16706219-16709840 Theobroma cacao
Thecc1EG028602 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16709341-16709840 Theobroma cacao
Thecc1EG028602 0.5kb downstream 0.5kb downstream 3622 true scaffold_6: 16705719-16709340 Theobroma cacao
Thecc1EG028602 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16705719-16706218 Theobroma cacao
Thecc1EG028602 1.0kb upstream 1.0kb upstream 4122 true scaffold_6: 16706219-16710340 Theobroma cacao
Thecc1EG028602 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16709341-16710340 Theobroma cacao
Thecc1EG028602 1.0kb downstream 1.0kb downstream 4122 true scaffold_6: 16705219-16709340 Theobroma cacao
Thecc1EG028602 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16705219-16706218 Theobroma cacao
Thecc1EG028602 2.0kb upstream 2.0kb upstream 5122 true scaffold_6: 16706219-16711340 Theobroma cacao
Thecc1EG028602 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16709341-16711340 Theobroma cacao
Thecc1EG028602 2.0kb downstream 2.0kb downstream 5122 true scaffold_6: 16704219-16709340 Theobroma cacao
Thecc1EG028602 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16704219-16706218 Theobroma cacao
Thecc1EG028602 5.0kb upstream 5.0kb upstream 8122 true scaffold_6: 16706219-16714340 Theobroma cacao
Thecc1EG028602 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16709341-16714340 Theobroma cacao
Thecc1EG028602 5.0kb downstream 5.0kb downstream 8122 true scaffold_6: 16701219-16709340 Theobroma cacao
Thecc1EG028602 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16701219-16706218 Theobroma cacao
Thecc1EG028602 10.0kb upstream 10.0kb upstream 13122 true scaffold_6: 16706219-16719340 Theobroma cacao
Thecc1EG028602 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16709341-16719340 Theobroma cacao
Thecc1EG028602 10.0kb downstream 10.0kb downstream 13122 true scaffold_6: 16696219-16709340 Theobroma cacao
Thecc1EG028602 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16696219-16706218 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828634 5264 Brassicales-Malvales View MSA
124350777 5266 SBM View MSA
124243399 5268 Malvidae View MSA
124060642 5270 Rosid View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain