Gene : Pavir.8NG152500 P. virgatum v4.1
Defline:  (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  1020
Name:  ? Pavir.8NG152500 Secondary Identifier:  ? PAC:37623853
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7409 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.8NG152500 0.5kb upstream 0.5kb upstream 13860 true Chr08N: 20395581-20409440 Panicum virgatum
Pavir.8NG152500 0.5kb upstream 0.5kb upstream 500 false Chr08N: 20395581-20396080 Panicum virgatum
Pavir.8NG152500 0.5kb downstream 0.5kb downstream 13860 true Chr08N: 20396081-20409940 Panicum virgatum
Pavir.8NG152500 0.5kb downstream 0.5kb downstream 500 false Chr08N: 20409441-20409940 Panicum virgatum
Pavir.8NG152500 1.0kb upstream 1.0kb upstream 14360 true Chr08N: 20395081-20409440 Panicum virgatum
Pavir.8NG152500 1.0kb upstream 1.0kb upstream 1000 false Chr08N: 20395081-20396080 Panicum virgatum
Pavir.8NG152500 1.0kb downstream 1.0kb downstream 14360 true Chr08N: 20396081-20410440 Panicum virgatum
Pavir.8NG152500 1.0kb downstream 1.0kb downstream 1000 false Chr08N: 20409441-20410440 Panicum virgatum
Pavir.8NG152500 2.0kb upstream 2.0kb upstream 15360 true Chr08N: 20394081-20409440 Panicum virgatum
Pavir.8NG152500 2.0kb upstream 2.0kb upstream 2000 false Chr08N: 20394081-20396080 Panicum virgatum
Pavir.8NG152500 2.0kb downstream 2.0kb downstream 15360 true Chr08N: 20396081-20411440 Panicum virgatum
Pavir.8NG152500 2.0kb downstream 2.0kb downstream 2000 false Chr08N: 20409441-20411440 Panicum virgatum
Pavir.8NG152500 5.0kb upstream 5.0kb upstream 18360 true Chr08N: 20391081-20409440 Panicum virgatum
Pavir.8NG152500 5.0kb upstream 5.0kb upstream 5000 false Chr08N: 20391081-20396080 Panicum virgatum
Pavir.8NG152500 5.0kb downstream 5.0kb downstream 18360 true Chr08N: 20396081-20414440 Panicum virgatum
Pavir.8NG152500 5.0kb downstream 5.0kb downstream 5000 false Chr08N: 20409441-20414440 Panicum virgatum
Pavir.8NG152500 10.0kb upstream 10.0kb upstream 23360 true Chr08N: 20386081-20409440 Panicum virgatum
Pavir.8NG152500 10.0kb upstream 10.0kb upstream 10000 false Chr08N: 20386081-20396080 Panicum virgatum
Pavir.8NG152500 10.0kb downstream 10.0kb downstream 23360 true Chr08N: 20396081-20419440 Panicum virgatum
Pavir.8NG152500 10.0kb downstream 10.0kb downstream 10000 false Chr08N: 20409441-20419440 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195592 5267 Panicoideae View MSA
124581521 5269 Grass View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain